RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 STK25O00506 426 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 FSCN2O14926 492 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
LSM6-204ENST00000504181 ADRB1P08588 477 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 WEE2P0C1S8 567 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 GNAT1P11488 350 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 GNAT2P19087 354 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 IBSPP21815 317 aaPredicted RBP14.68□□□□□ -0.06
LSM6-204ENST00000504181 SDHBP21912 280 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 ARHGAP4P98171 946 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 ZDHHC14Q8IZN3 488 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 APPBP2Q92624 585 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 NECTIN4Q96NY8 510 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 GPR179Q6PRD1 2367 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 FRYQ5TBA9 3013 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 CCDC171Q6TFL3 1326 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 PATL2C9JE40 543 aaKnown RBP14.67□□□□□ -0.06
LSM6-204ENST00000504181 FGF18O76093 207 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 NR3C2P08235 984 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 SP2Q02086 613 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 MGAT3Q09327 533 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 ZKSCAN2Q63HK3 967 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 RTN4RL1Q86UN2 441 aaPredicted RBP14.67□□□□□ -0.06
LSM6-204ENST00000504181 CRIPAKQ8N1N5 446 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 RASGRP4Q8TDF6 673 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 CDV3Q9UKY7 258 aaKnown RBP14.67□□□□□ -0.06
LSM6-204ENST00000504181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
LSM6-204ENST00000504181 ASPMQ8IZT6 3477 aa14.67□□□□□ -0.06
LSM6-204ENST00000504181 HIDE1A8MVS5 230 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 RANBP6O60518 1105 aaKnown RBP14.66□□□□□ -0.06
LSM6-204ENST00000504181 STAG3L1P0CL83 205 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
LSM6-204ENST00000504181 CTDSPL2Q05D32 466 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 FBXO47Q5MNV8 452 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 PDE12Q6L8Q7 609 aaKnown RBP14.66□□□□□ -0.06
LSM6-204ENST00000504181 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 THNSL1Q8IYQ7 743 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 SUMF1Q8NBK3 374 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 LMBR1Q8WVP7 490 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 ADAM7Q9H2U9 754 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 MLXIPQ9HAP2 919 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 ENTPD7Q9NQZ7 604 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 PXMP2Q9NR77 195 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 NCDNQ9UBB6 729 aa14.66□□□□□ -0.06
LSM6-204ENST00000504181 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
LSM6-204ENST00000504181 SP9P0CG40 484 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 PDHBP11177 359 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 MYCLP12524 364 aaPredicted RBP14.65□□□□□ -0.06
LSM6-204ENST00000504181 CD52P31358 61 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 MTHFRP42898 656 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 ADAM17P78536 824 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 ITIH3Q06033 890 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 TSHZ1Q6ZSZ6 1077 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 TRIM50Q86XT4 487 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 CASP10Q92851 521 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 TCF25Q9BQ70 676 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 NAPBQ9H115 298 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 AGO3Q9H9G7 860 aaKnown RBP14.65□□□□□ -0.06
LSM6-204ENST00000504181 HCSTQ9UBK5 93 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
LSM6-204ENST00000504181 EVPLQ92817 2033 aa14.65□□□□□ -0.06
LSM6-204ENST00000504181 RFX1P22670 979 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 NOVP48745 357 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 COL9A3Q14050 684 aaPredicted RBP14.64□□□□□ -0.07
LSM6-204ENST00000504181 RARS2Q5T160 578 aaKnown RBP14.64□□□□□ -0.07
LSM6-204ENST00000504181 KCNV1Q6PIU1 500 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
LSM6-204ENST00000504181 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 GPKOWQ92917 476 aaPredicted RBP eCLIP14.64□□□□□ -0.07
LSM6-204ENST00000504181 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
LSM6-204ENST00000504181 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 CPVLQ9H3G5 476 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 BCAS3Q9H6U6 928 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
LSM6-204ENST00000504181 AAASQ9NRG9 546 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 LRFN2Q9ULH4 789 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 DUSP12Q9UNI6 340 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 ABCB11O95342 1321 aa14.64□□□□□ -0.07
LSM6-204ENST00000504181 ZFYVE26Q68DK2 2539 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 MYH15Q9Y2K3 1946 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 DOCK8Q8NF50 2099 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 NOP56O00567 594 aaKnown RBP14.63□□□□□ -0.07
LSM6-204ENST00000504181 RNF113AO15541 343 aaKnown RBP14.63□□□□□ -0.07
LSM6-204ENST00000504181 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
LSM6-204ENST00000504181 SCG2P13521 617 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 TDGQ13569 410 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 KBTBD3Q8NAB2 608 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 RTKNQ9BST9 563 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 CYP26B1Q9NR63 512 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 HCFC2Q9Y5Z7 792 aa14.63□□□□□ -0.07
LSM6-204ENST00000504181 ZZEF1O43149 2961 aa14.62□□□□□ -0.07
LSM6-204ENST00000504181 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
LSM6-204ENST00000504181 EOMESO95936 686 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms