RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 CCNT1O60563 726 aaKnown RBP23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 GCFC2P16383 781 aaKnown RBP23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 SAFBQ15424 915 aaKnown RBP eCLIP23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 LRCH2Q5VUJ6 765 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 MIS18BP1Q6P0N0 1132 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 SERINC5Q86VE9 423 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 CCDC60Q8IWA6 550 aaPredicted RBP23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 CCDC155Q8N6L0 562 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 ETNPPLQ8TBG4 499 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 CAGE1Q8TC20 777 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 LMBR1Q8WVP7 490 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 IL23AQ9NPF7 189 aa23.35■■□□□ 1.33
PDGFRA-203ENST00000503856 NRCAMQ92823 1304 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 PSMD10O75832 226 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 GNAT1P11488 350 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 ADAM17P78536 824 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 PPFIA1Q13136 1202 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 PLCB4Q15147 1175 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 FAM160B1Q5W0V3 765 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 SWSAP1Q6NVH7 229 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 SMAP1Q8IYB5 467 aaPredicted RBP23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 NAP1L4Q99733 375 aaKnown RBP23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 TEKT3Q9BXF9 490 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 ZNF302Q9NR11 478 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
PDGFRA-203ENST00000503856 IQCF3P0C7M6 154 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 CKBP12277 381 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 RBL2Q08999 1139 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 GRIK4Q16099 956 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 TRIM71Q2Q1W2 868 aaKnown RBP23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 TMEM240Q5SV17 173 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 AFAP1L1Q8TED9 768 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 UNC45AQ9H3U1 944 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 SAMM50Q9Y512 469 aa23.33■■□□□ 1.33
PDGFRA-203ENST00000503856 LOXHD1Q8IVV2 1947 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 WDR64B1ANS9 1081 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 CHMP2AO43633 222 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 PSAPP07602 524 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 INSRRP14616 1297 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 FXR1P51114 621 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 PDXDC2PQ6P474 469 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 ZNF365Q70YC5 407 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 VWCEQ96DN2 955 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 KCNMB3Q9NPA1 279 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 DISC1Q9NRI5 854 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 TRPC6Q9Y210 931 aa23.32■■□□□ 1.32
PDGFRA-203ENST00000503856 POTEB3A0JP26 581 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 SOX1O00570 391 aaPredicted RBP23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 WNT7AO00755 349 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 SELPP16109 830 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 SLC26A2P50443 739 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 LRIT3Q3SXY7 679 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 POTEBQ6S5H4 581 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 DEFB128Q7Z7B8 93 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 RPUSD2Q8IZ73 545 aaKnown RBP23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 FAM20AQ96MK3 541 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 FOXP1Q9H334 677 aaPredicted RBP23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 GABBR1Q9UBS5 961 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 KIF3AQ9Y496 699 aa23.31■■□□□ 1.32
PDGFRA-203ENST00000503856 ATP4AP20648 1035 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 GJB2P29033 226 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 SFNP31947 248 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 THPOP40225 353 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 IGBP1P78318 339 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 MARCH8Q5T0T0 291 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 ZNF618Q5T7W0 954 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 PSRC1Q6PGN9 363 aaPredicted RBP23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 B3GNT9Q6UX72 402 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 LRRC8DQ7L1W4 858 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 HAS1Q92839 578 aa23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 RNPC3Q96LT9 517 aaKnown RBP23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 MAFBQ9Y5Q3 323 aaPredicted RBP23.3■■□□□ 1.32
PDGFRA-203ENST00000503856 RRN3P2A6NIE6 340 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 FGBP02675 491 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 ATP2B1P20020 1258 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 JAK3P52333 1124 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 TRAF7Q6Q0C0 670 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 MIER3Q7Z3K6 550 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 ATP8B4Q8TF62 1192 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 TRAPPC12Q8WVT3 735 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 TNPO1Q92973 898 aaKnown RBP23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 TUBE1Q9UJT0 475 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 SMC3Q9UQE7 1217 aa23.29■■□□□ 1.32
PDGFRA-203ENST00000503856 LAMA3Q16787 3333 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 MBLAC1A4D2B0 266 aaPredicted RBP23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 KIF28PB7ZC32 967 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 TBX3O15119 743 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 MARCH6O60337 910 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 RFC2P35250 354 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 CUL4AQ13619 759 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 GNL2Q13823 731 aaKnown RBP23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 GPNMBQ14956 572 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 RUFY4Q6ZNE9 571 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 TRMT1LQ7Z2T5 733 aaKnown RBP23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 CKAP2LQ8IYA6 745 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 ZBTB10Q96DT7 871 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 LRCH3Q96II8 777 aa23.28■■□□□ 1.32
PDGFRA-203ENST00000503856 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms