RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NOP53Q9NZM5 478 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NDUFA13Q9P0J0 144 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ANKIB1Q9P2G1 1089 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 FAM184BQ9ULE4 1060 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ERICH2A1L162 156 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CTAGE9A4FU28 777 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CEP104O60308 925 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SHOX2O60902 331 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ATP2C2O75185 946 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RPLP2P05387 115 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NPR1P16066 1061 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SEMA3BQ13214 749 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SNCBQ16143 134 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PFKFB3Q16875 520 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 WLSQ5T9L3 541 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 KANK3Q6NY19 840 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RHBDF2Q6PJF5 856 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PTF1AQ7RTS3 328 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 REXO1L1PQ8IX06 675 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CNTROBQ8N137 903 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 DRAXINQ8NBI3 349 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RNF217Q8TC41 542 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 HDAC7Q8WUI4 952 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 N4BP2L2Q92802 583 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ARHGEF1Q92888 912 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RIT2Q99578 217 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PYM1Q9BRP8 204 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 BCL2L13Q9BXK5 485 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CFAP46Q8IYW2 2715 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PRAMEF22A3QJZ6 481 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ZBTB42B2RXF5 422 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NEBLO76041 1014 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 OLFM2O95897 454 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PAK2Q13177 524 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NAA25Q14CX7 972 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 LRRC23Q53EV4 343 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CAPRIN2Q6IMN6 1127 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC80Q76M96 950 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC65Q8IXS2 484 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 OTUD7AQ8TE49 926 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GTF3C2Q8WUA4 911 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 IRGQQ8WZA9 623 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ARPP21Q9UBL0 812 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CHMP3Q9Y3E7 222 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 YDJCA8MPS7 323 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SLC3A2P08195 630 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CNGA1P29973 690 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PAFAH1B1P43034 410 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CCZ1BP86790 482 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CCZ1P86791 482 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PPP2R5CQ13362 524 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NNTQ13423 1086 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PPP2R5EQ16537 467 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TTI2Q6NXR4 508 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PPFIBP1Q86W92 1011 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RBM12BQ8IXT5 1001 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC12Q8WUD4 166 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CD101Q93033 1021 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PARD6BQ9BYG5 372 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 FNIP2Q9P278 1114 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 AMFRQ9UKV5 643 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LRP4O75096 1905 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MICAL3Q7RTP6 2002 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 POLR2AP24928 1970 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LRRD1A4D1F6 860 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 H3BQV1 296 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF623O75123 536 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CHGAP10645 457 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NAMPTP43490 491 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MNX1P50219 401 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 IRAK1P51617 712 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SKOR1P84550 965 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SCRN1Q12765 414 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 AP3B2Q13367 1082 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TFDP1Q14186 410 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 GLE1Q53GS7 698 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 IFFO2Q5TF58 517 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RESP18Q5W5W9 173 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 ISM2Q6H9L7 571 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MCM10Q7L590 875 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KLHDC8AQ8IYD2 350 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 DAW1Q8N136 415 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 STK32AQ8WU08 396 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NUP133Q8WUM0 1156 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LPAR1Q92633 364 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 HAS1Q92839 578 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CAPS2Q9BXY5 557 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MIS12Q9H081 205 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KIAA1024Q9UPX6 916 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NUB1Q9Y5A7 615 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SRPRBQ9Y5M8 271 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SSU72P8A0A1W2PR75 194 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SPDYE5A6NIY4 337 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 ERBB2P04626 1255 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LIG3P49916 1009 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TKFCQ3LXA3 575 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KBTBD12Q3ZCT8 623 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SPECC1Q5M775 1068 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 POTEAQ6S8J7 498 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms