RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SMIM10L2AP0DMW4 78 aa28.32■■■□□ 2.12
LSM6-202ENST00000502781 SMIM10L2BP0DMW5 78 aa28.32■■■□□ 2.12
LSM6-202ENST00000502781 HIC1Q14526 733 aa28.32■■■□□ 2.12
LSM6-202ENST00000502781 GDF6Q6KF10 455 aaPredicted RBP28.32■■■□□ 2.12
LSM6-202ENST00000502781 SWSAP1Q6NVH7 229 aa28.32■■■□□ 2.12
LSM6-202ENST00000502781 ZNF302Q9NR11 478 aa28.32■■■□□ 2.12
LSM6-202ENST00000502781 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.32■■■□□ 2.12
LSM6-202ENST00000502781 IGSF9BQ9UPX0 1349 aa28.31■■■□□ 2.12
LSM6-202ENST00000502781 TRIM43BA6NCK2 446 aa28.31■■■□□ 2.12
LSM6-202ENST00000502781 CHMP2AO43633 222 aa28.31■■■□□ 2.12
LSM6-202ENST00000502781 FAM160B1Q5W0V3 765 aa28.31■■■□□ 2.12
LSM6-202ENST00000502781 MIER3Q7Z3K6 550 aa28.31■■■□□ 2.12
LSM6-202ENST00000502781 TRIM43Q96BQ3 446 aaPredicted RBP28.31■■■□□ 2.12
LSM6-202ENST00000502781 H0YGN5 161 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 EML1O00423 815 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 BACH1O14867 736 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 MARCH6O60337 910 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 PDIA4P13667 645 aaKnown RBP28.3■■■□□ 2.12
LSM6-202ENST00000502781 MARK3P27448 753 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 ADAM17P78536 824 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 PLCB4Q15147 1175 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 FERMT3Q86UX7 667 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 TMEM39AQ9NV64 488 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 ZMYND8Q9ULU4 1186 aaPredicted RBP28.3■■■□□ 2.12
LSM6-202ENST00000502781 PCDHA12Q9UN75 941 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 SAMM50Q9Y512 469 aa28.3■■■□□ 2.12
LSM6-202ENST00000502781 ATP4AP20648 1035 aa28.29■■■□□ 2.12
LSM6-202ENST00000502781 RESTQ13127 1097 aa28.29■■■□□ 2.12
LSM6-202ENST00000502781 BECN1Q14457 450 aa28.29■■■□□ 2.12
LSM6-202ENST00000502781 TTC12Q9H892 705 aaPredicted RBP28.29■■■□□ 2.12
LSM6-202ENST00000502781 GABBR1Q9UBS5 961 aa28.29■■■□□ 2.12
LSM6-202ENST00000502781 NRCAMQ92823 1304 aa28.29■■■□□ 2.12
LSM6-202ENST00000502781 OR52Z1P0C646 297 aa28.28■■■□□ 2.12
LSM6-202ENST00000502781 PTGISQ16647 500 aa28.28■■■□□ 2.12
LSM6-202ENST00000502781 PDXDC2PQ6P474 469 aa28.28■■■□□ 2.12
LSM6-202ENST00000502781 SPRYD3Q8NCJ5 442 aa28.28■■■□□ 2.12
LSM6-202ENST00000502781 C17orf102A2RUQ5 167 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 SYN1P17600 705 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 TXKP42681 527 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 ATP8B4Q8TF62 1192 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 LMBR1Q8WVP7 490 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 PRDM5Q9NQX1 630 aaPredicted RBP28.27■■■□□ 2.12
LSM6-202ENST00000502781 SETD4Q9NVD3 440 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 PRKAG2Q9UGJ0 569 aa28.27■■■□□ 2.12
LSM6-202ENST00000502781 POTEB3A0JP26 581 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 ZNF862O60290 1169 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 ITGB8P26012 769 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 ZNF200P98182 395 aaPredicted RBP28.26■■■□□ 2.12
LSM6-202ENST00000502781 PTGDRQ13258 359 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 EPHA7Q15375 998 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 UGCGQ16739 394 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 POTEBQ6S5H4 581 aa28.26■■■□□ 2.12
LSM6-202ENST00000502781 NOC4LQ9BVI4 516 aaKnown RBP28.26■■■□□ 2.12
LSM6-202ENST00000502781 LAD1O00515 517 aa28.25■■■□□ 2.11
LSM6-202ENST00000502781 CYP2C9P11712 490 aa28.25■■■□□ 2.11
LSM6-202ENST00000502781 INSRRP14616 1297 aa28.25■■■□□ 2.11
LSM6-202ENST00000502781 PPFIA1Q13136 1202 aa28.25■■■□□ 2.11
LSM6-202ENST00000502781 TNPO1Q92973 898 aaKnown RBP28.25■■■□□ 2.11
LSM6-202ENST00000502781 ZSCAN16Q9H4T2 348 aaPredicted RBP28.25■■■□□ 2.11
LSM6-202ENST00000502781 MBLAC1A4D2B0 266 aaPredicted RBP28.24■■■□□ 2.11
LSM6-202ENST00000502781 HBP1O60381 514 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 GNAT1P11488 350 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 PTK7Q13308 1070 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 GRIK4Q16099 956 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 SERINC5Q86VE9 423 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 BBXQ8WY36 941 aaPredicted RBP28.24■■■□□ 2.11
LSM6-202ENST00000502781 DHX38Q92620 1227 aaKnown RBP28.24■■■□□ 2.11
LSM6-202ENST00000502781 TRPC6Q9Y210 931 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 RRN3P2A6NIE6 340 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 TIMP1P01033 207 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 PRPHP41219 470 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 ATP2C1P98194 919 aaPredicted RBP28.24■■■□□ 2.11
LSM6-202ENST00000502781 RBL2Q08999 1139 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 MARCH8Q5T0T0 291 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 NCAPH2Q6IBW4 605 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 ATP6V0A1Q93050 837 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 PCDH10Q9P2E7 1040 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 NOD1Q9Y239 953 aa28.24■■■□□ 2.11
LSM6-202ENST00000502781 TREHO43280 583 aa28.23■■■□□ 2.11
LSM6-202ENST00000502781 STBD1O95210 358 aa28.23■■■□□ 2.11
LSM6-202ENST00000502781 P4HBP07237 508 aaKnown RBP28.23■■■□□ 2.11
LSM6-202ENST00000502781 FXR2P51116 673 aaKnown RBP eCLIP28.23■■■□□ 2.11
LSM6-202ENST00000502781 FAM167AQ96KS9 214 aa28.23■■■□□ 2.11
LSM6-202ENST00000502781 HIPK3Q9H422 1215 aa28.23■■■□□ 2.11
LSM6-202ENST00000502781 ZBTB42B2RXF5 422 aa28.22■■■□□ 2.11
LSM6-202ENST00000502781 RAG1P15918 1043 aa28.22■■■□□ 2.11
LSM6-202ENST00000502781 PSMC5P62195 406 aa28.22■■■□□ 2.11
LSM6-202ENST00000502781 PRKCEQ02156 737 aa28.22■■■□□ 2.11
LSM6-202ENST00000502781 TRIM71Q2Q1W2 868 aaKnown RBP28.22■■■□□ 2.11
LSM6-202ENST00000502781 PRPF38BQ5VTL8 546 aaKnown RBP28.22■■■□□ 2.11
LSM6-202ENST00000502781 HSD17B14Q9BPX1 270 aa28.22■■■□□ 2.11
LSM6-202ENST00000502781 COL1A2P08123 1366 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 POTEMA6NI47 508 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 PITPNM1O00562 1244 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 OATP04181 439 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 QARSP47897 775 aaKnown RBP28.21■■■□□ 2.11
LSM6-202ENST00000502781 PKP1Q13835 747 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 FAM173BQ6P4H8 233 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 CKAP2LQ8IYA6 745 aa28.21■■■□□ 2.11
LSM6-202ENST00000502781 BANK1Q8NDB2 785 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms