RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CKBP12277 381 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 CEACAM1P13688 526 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 HOXB8P17481 243 aaPredicted RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 MCAMP43121 646 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 USP14P54578 494 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 IFIT5Q13325 482 aaKnown RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 DUSP27Q5VZP5 1158 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 NFRKBQ6P4R8 1299 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 LYPD8Q6UX82 237 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 TRMT2AQ8IZ69 625 aaKnown RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 CCDC155Q8N6L0 562 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 PNMA1Q8ND90 353 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 DBF4BQ8NFT6 615 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 FEZF2Q8TBJ5 459 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 WDR66Q8TBY9 1149 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 MDM1Q8TC05 714 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 GPR152Q8TDT2 470 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 FAM126AQ9BYI3 521 aaPredicted RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 IFIH1Q9BYX4 1025 aaKnown RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
FXN-205ENST00000498653 PRDM9Q9NQV7 894 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 BOD1L1Q8NFC6 3051 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 SPAG17Q6Q759 2223 aa6.34□□□□□ -1.39
FXN-205ENST00000498653 PDZD2O15018 2839 aa6.34□□□□□ -1.4
FXN-205ENST00000498653 SDK1Q7Z5N4 2213 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 A0A087WV48 116 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 CAPN8A6NHC0 703 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 NEURL1BA8MQ27 555 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 ZBTB24O43167 697 aaPredicted RBP6.33□□□□□ -1.4
FXN-205ENST00000498653 ZNF806P0C7X5 589 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 BTDP43251 543 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 EXOSC9Q06265 439 aaKnown RBP6.33□□□□□ -1.4
FXN-205ENST00000498653 FLIIQ13045 1269 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 LLGL2Q6P1M3 1020 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 LDHAL6AQ6ZMR3 332 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 METTL16Q86W50 562 aaKnown RBP6.33□□□□□ -1.4
FXN-205ENST00000498653 RIOX2Q8IUF8 465 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 RASGRP4Q8TDF6 673 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 BCO2Q9BYV7 579 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 HOXC10Q9NYD6 342 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 AHCTF1Q8WYP5 2266 aa6.33□□□□□ -1.4
FXN-205ENST00000498653 DOCK8Q8NF50 2099 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 MTORP42345 2549 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 RNF223E7ERA6 249 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 DDX58O95786 925 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 GH2P01242 217 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 LDHBP07195 334 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 SRGAP2BP0DMP2 458 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 SRFP11831 508 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 CSRP1P21291 193 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 MTHFRP42898 656 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 STARD6P59095 220 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 FOXO4P98177 505 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 ITIH3Q06033 890 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 PTPN11Q06124 597 aaPredicted RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 PTGISQ16647 500 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 TRIM71Q2Q1W2 868 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 CAVIN4Q5BKX8 364 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 RNF43Q68DV7 783 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 KIAA1841Q6NSI8 718 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 XRRA1Q6P2D8 792 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 NOL8Q76FK4 1167 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 CCDC144CPQ8IYA2 1237 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 KLHL23Q8NBE8 558 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 RSAD2Q8WXG1 361 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 WNT8BQ93098 351 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 CHMP4AQ9BY43 222 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 PUS3Q9BZE2 481 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 ZNF768Q9H5H4 540 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 PRORYQ9H606 182 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 CNNM1Q9NRU3 951 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 NXF1Q9UBU9 619 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 NOD1Q9Y239 953 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 FCF1Q9Y324 198 aaKnown RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 MTF2Q9Y483 593 aaPredicted RBP6.32□□□□□ -1.4
FXN-205ENST00000498653 MYH7BA7E2Y1 1941 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 LOXHD1Q8IVV2 1947 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 NAV1Q8NEY1 1877 aa6.32□□□□□ -1.4
FXN-205ENST00000498653 LCTP09848 1927 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 CENPEQ02224 2701 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ATG2BQ96BY7 2078 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 B8ZZF3 427 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 CAPN9O14815 690 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 HOXB7P09629 217 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 CT47B1P0C2W7 299 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 CTHP32929 405 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 SRSF5Q13243 272 aaKnown RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 SERINC3Q13530 473 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 SIM2Q14190 667 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 TWISTNBQ3B726 338 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 NAALADL2Q58DX5 795 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 PLEKHG4Q58EX7 1191 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms