RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CDY2AQ9Y6F7 541 aa18.49■□□□□ 0.55
MUC1-220ENST00000498431 MBLAC1A4D2B0 266 aaPredicted RBP18.48■□□□□ 0.55
MUC1-220ENST00000498431 NCK2O43639 380 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 MMP1P03956 469 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 MRE11P49959 708 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 NHLH1Q02575 133 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 SART3Q15020 963 aaKnown RBP18.48■□□□□ 0.55
MUC1-220ENST00000498431 MB21D2Q8IYB1 491 aaPredicted RBP18.48■□□□□ 0.55
MUC1-220ENST00000498431 GPRASP2Q96D09 838 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
MUC1-220ENST00000498431 LY9Q9HBG7 655 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 MUTYHQ9UIF7 546 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 RWDD3Q9Y3V2 267 aa18.48■□□□□ 0.55
MUC1-220ENST00000498431 MRPL42Q9Y6G3 142 aaKnown RBP18.48■□□□□ 0.55
MUC1-220ENST00000498431 DGKIO75912 1065 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 DNAJB1P25685 340 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 CHMLP26374 656 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 CD52P31358 61 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 IGBP1P78318 339 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 COL9A3Q14050 684 aaPredicted RBP18.47■□□□□ 0.55
MUC1-220ENST00000498431 TSHZ1Q6ZSZ6 1077 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
MUC1-220ENST00000498431 ZNF654Q8IZM8 581 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 CMTR1Q8N1G2 835 aaKnown RBP18.47■□□□□ 0.55
MUC1-220ENST00000498431 CRIPAKQ8N1N5 446 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 GIMAP8Q8ND71 665 aaPredicted RBP18.47■□□□□ 0.55
MUC1-220ENST00000498431 SEPT1Q8WYJ6 367 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 PLAGL2Q9UPG8 496 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 LOXHD1Q8IVV2 1947 aa18.47■□□□□ 0.55
MUC1-220ENST00000498431 MRPS6P82932 125 aaKnown RBP18.46■□□□□ 0.55
MUC1-220ENST00000498431 ADAM15Q13444 863 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 SMAD4Q13485 552 aaKnown RBP18.46■□□□□ 0.55
MUC1-220ENST00000498431 UBE2SQ16763 222 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 ADGRD2Q7Z7M1 963 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
MUC1-220ENST00000498431 GLG1Q92896 1179 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 PCYT2Q99447 389 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 FAM49AQ9H0Q0 323 aaPredicted RBP18.46■□□□□ 0.55
MUC1-220ENST00000498431 UBIAD1Q9Y5Z9 338 aa18.46■□□□□ 0.55
MUC1-220ENST00000498431 USP34Q70CQ2 3546 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 TECTAO75443 2155 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 hCG_1642624A0A1W2PR95 340 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 ITGB1P05556 798 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 TMEM62Q0P6H9 643 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 HERC4Q5GLZ8 1057 aaPredicted RBP18.45■□□□□ 0.54
MUC1-220ENST00000498431 RNF135Q8IUD6 432 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 CTCFLQ8NI51 663 aaPredicted RBP18.45■□□□□ 0.54
MUC1-220ENST00000498431 MSLNLQ96KJ4 702 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 UPF3BQ9BZI7 483 aaKnown RBP18.45■□□□□ 0.54
MUC1-220ENST00000498431 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
MUC1-220ENST00000498431 CD207Q9UJ71 328 aa18.45■□□□□ 0.54
MUC1-220ENST00000498431 DDAH1O94760 285 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 INSRRP14616 1297 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 RXRAP19793 462 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 GATMP50440 423 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 MTMR1Q13613 665 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 PAN2Q504Q3 1202 aaKnown RBP18.44■□□□□ 0.54
MUC1-220ENST00000498431 SPPL3Q8TCT6 385 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 TRAPPC12Q8WVT3 735 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 RUFY2Q8WXA3 655 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 P2RX5Q93086 422 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 CDHR1Q96JP9 859 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 POP1Q99575 1024 aaKnown RBP18.44■□□□□ 0.54
MUC1-220ENST00000498431 SMARCAD1Q9H4L7 1026 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 PSTPIP2Q9H939 334 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 PCDHGC5Q9Y5F6 944 aa18.44■□□□□ 0.54
MUC1-220ENST00000498431 PLXNA4Q9HCM2 1894 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 STXBP3O00186 592 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 SGSM2O43147 1006 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 SMARCA1P28370 1054 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 KIF5BP33176 963 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 NDUFV1P49821 464 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 KLHL23Q8NBE8 558 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 CLEC1BQ9P126 229 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
MUC1-220ENST00000498431 PRC1O43663 620 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 NPAS4Q8IUM7 802 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 CMTR2Q8IYT2 770 aaKnown RBP18.42■□□□□ 0.54
MUC1-220ENST00000498431 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 KCNH6Q9H252 994 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 JADE2Q9NQC1 790 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 TRPV2Q9Y5S1 764 aa18.42■□□□□ 0.54
MUC1-220ENST00000498431 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
MUC1-220ENST00000498431 EYA4O95677 639 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 GLP2RO95838 553 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 PLCB4Q15147 1175 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 IER5Q5VY09 327 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 CCDC82Q8N4S0 544 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 POF1BQ8WVV4 589 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 LZTS2Q9BRK4 669 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 TMX1Q9H3N1 280 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 JPH1Q9HDC5 661 aaPredicted RBP18.41■□□□□ 0.54
MUC1-220ENST00000498431 PCDHA6Q9UN73 950 aa18.41■□□□□ 0.54
MUC1-220ENST00000498431 PCDHA8Q9Y5H6 950 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms