RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 DEKP35659 375 aaKnown RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 TM4SF4P48230 202 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 MCM2P49736 904 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 ORC1Q13415 861 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 GRAPQ13588 217 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 CAVIN4Q5BKX8 364 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 PHLDB3Q6NSJ2 640 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 NPAS4Q8IUM7 802 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 GRAPLQ8TC17 118 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 DPF3Q92784 378 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 CELF1Q92879 486 aaKnown RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 RELTQ969Z4 430 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 CCDC120Q96HB5 630 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 SNX27Q96L92 541 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 KIF2CQ99661 725 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 LSG1Q9H089 658 aaKnown RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 BRPF3Q9ULD4 1205 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 MINPP1Q9UNW1 487 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 AKAP11Q9UKA4 1901 aa6.29□□□□□ -1.4
HMGXB4-208ENST00000498325 CCDC171Q6TFL3 1326 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 BBOX1O75936 387 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 GLDCP23378 1020 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 PHKA1P46020 1223 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 MOB2Q70IA6 237 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 NIM1KQ8IY84 436 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 MAP4K1Q92918 833 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 IL17RAQ96F46 866 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 EDC3Q96F86 508 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 ZNF333Q96JL9 665 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 FAM227BQ96M60 508 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 HSPA12BQ96MM6 686 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 TMX4Q9H1E5 349 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 SEMA3GQ9NS98 782 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 CNOT7Q9UIV1 285 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
HMGXB4-208ENST00000498325 MUC3AQ02505 3323 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 A0A0D9SFI3 127 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 A0A1W2PPC1 479 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 FRAT2O75474 233 aaPredicted RBP6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 EOMESO95936 686 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 HSP90AA1P07900 732 aaKnown RBP6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 PSMA5P28066 241 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 ALDH1B1P30837 517 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 MCAMP43121 646 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 NEK4P51957 841 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 LINC00310P59036 64 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 PTH1RQ03431 593 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 MAP3K12Q12852 859 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 KRT32Q14532 448 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 NECTIN1Q15223 517 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 SULF2Q8IWU5 870 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 SPATA5Q8NB90 893 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 APPBP2Q92624 585 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 KCNN1Q92952 543 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 CCDC74AQ96AQ1 378 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 TM6SF1Q9BZW5 370 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 HMG20BQ9P0W2 317 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 CTNNA3Q9UI47 895 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 SNX14Q9Y5W7 946 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 ARAP2Q8WZ64 1704 aa6.27□□□□□ -1.41
HMGXB4-208ENST00000498325 ZNF804BA4D1E1 1349 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 ASTN2O75129 1339 aaPredicted RBP6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 XDHP47989 1333 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 CEP290O15078 2479 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 PPIP5K2O43314 1243 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 IGSF3O75054 1194 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 IDH1O75874 414 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 RAD17O75943 681 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 RAC2P15153 192 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 HIBADHP31937 336 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 UBE3CQ15386 1083 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 CRY2Q49AN0 593 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 TBC1D10BQ4KMP7 808 aaPredicted RBP6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 PPM1JQ5JR12 505 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 SLC9C2Q5TAH2 1124 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 CREB3L3Q68CJ9 461 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 DTHD1Q6ZMT9 781 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 ABHD4Q8TB40 342 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 STK35Q8TDR2 534 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 GPBAR1Q8TDU6 330 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 CDCA5Q96FF9 252 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 IRF2BPLQ9H1B7 796 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 IL25Q9H293 177 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 PARD6AQ9NPB6 346 aa6.26□□□□□ -1.41
HMGXB4-208ENST00000498325 ZNRF3Q9ULT6 936 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms