RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 CEP290O15078 2479 aa12.86□□□□□ -0.35
CTTN-208ENST00000498223 EML1O00423 815 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 CUTAO60888 179 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 LGALS2P05162 132 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 ASGR1P07306 291 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 MARK3P27448 753 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 LONP1P36776 959 aaKnown RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 STAT5BP51692 787 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 PDIA5Q14554 519 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 IL17AQ16552 155 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 PDXDC2PQ6P474 469 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 ABHD15Q6UXT9 468 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 TPH2Q8IWU9 490 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 KLHDC9Q8NEP7 349 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 SMARCAD1Q9H4L7 1026 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 ZNF215Q9UL58 517 aaPredicted RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
CTTN-208ENST00000498223 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
CTTN-208ENST00000498223 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 DNM1LO00429 736 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTTN-208ENST00000498223 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
CTTN-208ENST00000498223 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
CTTN-208ENST00000498223 CDC25AP30304 524 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 TXLNAP40222 546 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 UBA7P41226 1012 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 ATP6V0A1Q93050 837 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 AK8Q96MA6 479 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 TSEN34Q9BSV6 310 aaKnown RBP12.84□□□□□ -0.35
CTTN-208ENST00000498223 MTG1Q9BT17 334 aaPredicted RBP12.84□□□□□ -0.35
CTTN-208ENST00000498223 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
CTTN-208ENST00000498223 MOXD2PA6NHM9 499 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 H3BRB1 525 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CTAGE5O15320 804 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 ATG7O95352 703 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 QARSP47897 775 aaKnown RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 PSEN2P49810 448 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTTN-208ENST00000498223 ACLYP53396 1101 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 PSMC5P62195 406 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 GRIN1Q05586 938 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CTTNQ14247 550 aaKnown RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 MFSD10Q14728 455 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CABP7Q86V35 215 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CCDC60Q8IWA6 550 aaPredicted RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 NEK9Q8TD19 979 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 GLT1D1Q96MS3 346 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
CTTN-208ENST00000498223 ERAP1Q9NZ08 941 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 PCDHA7Q9UN72 937 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
CTTN-208ENST00000498223 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 EVI5O60447 810 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 LGR5O75473 907 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 CABYRO75952 493 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 PSMC6P62333 389 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 NKX3-2P78367 333 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 B3GNT9Q6UX72 402 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 PLPPR4Q7Z2D5 763 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 NECAB2Q7Z6G3 386 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 PAWRQ96IZ0 340 aaKnown RBP12.82□□□□□ -0.36
CTTN-208ENST00000498223 PCYT2Q99447 389 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 PLIN2Q99541 437 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 LXNQ9BS40 222 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
CTTN-208ENST00000498223 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
CTTN-208ENST00000498223 TUFT1Q9NNX1 390 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
CTTN-208ENST00000498223 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms