RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 DEFB103AP81534 67 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 NTRK3Q16288 839 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 TCTN1Q2MV58 587 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 NIPA1Q7RTP0 329 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 REXO1Q8N1G1 1221 aaKnown RBP9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 ZBED2Q9BTP6 218 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 TM6SF1Q9BZW5 370 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 AZI2Q9H6S1 392 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 NCOA5Q9HCD5 579 aaKnown RBP9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 AGO4Q9HCK5 861 aaKnown RBP9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 CYP3A4P08684 503 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 ACTR2P61160 394 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PPFIA1Q13136 1202 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 ADGRE1Q14246 886 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 GRIK4Q16099 956 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PLEKHG4Q58EX7 1191 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 TMCO2Q7Z6W1 182 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 RSPH3Q86UC2 560 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PLA2G4DQ86XP0 818 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 USP38Q8NB14 1042 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 DBF4BQ8NFT6 615 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 BICD2Q8TD16 824 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 CRYGNQ8WXF5 182 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PPM1EQ8WY54 764 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PCYT2Q99447 389 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 UPF3BQ9BZI7 483 aaKnown RBP9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 VPS54Q9P1Q0 977 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.86
HMGXB4-207ENST00000498212 IGLV3-22A0A075B6J6 115 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 MBLAC1A4D2B0 266 aaPredicted RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM86B1E9PN63 330 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 RBAK-RBAKDNI3L0D1 243 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 DDX39AO00148 427 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 CPLX1O14810 134 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 ATG7O95352 703 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 GJB5O95377 273 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 AMHP03971 560 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM86B2P0C5J1 330 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 STAT5BP51692 787 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 IGBP1P78318 339 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 SETQ01105 290 aaPredicted RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 TAP1Q03518 808 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 SSRP1Q08945 709 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM26DQ5JW98 314 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 RUFY4Q6ZNE9 571 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 PLPPR4Q7Z2D5 763 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 RPAINQ86UA6 219 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 SEPT8Q92599 483 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 APBB2Q92870 758 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 ZNF274Q96GC6 653 aaPredicted RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 CERS4Q9HA82 394 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
HMGXB4-207ENST00000498212 KIAA1671Q9BY89 1806 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 IGKV6D-21A0A0A0MT36 114 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 LCHNA4D1U4 455 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 RFXAPO00287 272 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 IPO5O00410 1097 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 ARHGEF15O94989 841 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 CHRNA1P02708 482 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 CENPBP07199 599 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 INSRRP14616 1297 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 SLC26A2P50443 739 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 NLRP5P59047 1200 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 STK3Q13188 491 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 PLCB4Q15147 1175 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 MARCH8Q5T0T0 291 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM117BQ6P1L5 589 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 CPLX2Q6PUV4 134 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 MYOCDQ8IZQ8 938 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 DNAJB3Q8WWF6 145 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 ARNTL2Q8WYA1 636 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 RAD9AQ99638 391 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 ZNF577Q9BSK1 485 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 OSBPL7Q9BZF2 842 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
HMGXB4-207ENST00000498212 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 CHD9Q3L8U1 2897 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 COL4A6Q14031 1691 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 EPOPA6NHQ4 379 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 M0QZ92 97 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 BACH1O14867 736 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 DHX15O43143 795 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms