RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CDK5RAP3Q96JB5 506 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 AK8Q96MA6 479 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 EIF2AK1Q9BQI3 630 aaKnown RBP15.23■□□□□ 0.03
CPNE1-227ENST00000498056 ZNF302Q9NR11 478 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 GABBR1Q9UBS5 961 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 ALPK3Q96L96 1907 aa15.23■□□□□ 0.03
CPNE1-227ENST00000498056 A6NJR5 290 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 ZEB2O60315 1214 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-227ENST00000498056 UBA7P41226 1012 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 PDIA5Q14554 519 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 LRRC41Q15345 812 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 EPHA7Q15375 998 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-227ENST00000498056 SWSAP1Q6NVH7 229 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 POTEGQ6S5H5 508 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 ABHD15Q6UXT9 468 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 CKAP2LQ8IYA6 745 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 ATP6V0A1Q93050 837 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 RGL1Q9NZL6 768 aa15.22■□□□□ 0.03
CPNE1-227ENST00000498056 ZNF215Q9UL58 517 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-227ENST00000498056 CTAGE5O15320 804 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 MED24O75448 989 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 PRKCEQ02156 737 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 KARSQ15046 597 aaKnown RBP15.21■□□□□ 0.03
CPNE1-227ENST00000498056 PDXDC2PQ6P474 469 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 USP49Q70CQ1 688 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 TRMT1LQ7Z2T5 733 aaKnown RBP15.21■□□□□ 0.03
CPNE1-227ENST00000498056 U2AF1L4Q8WU68 220 aaKnown RBP15.21■□□□□ 0.03
CPNE1-227ENST00000498056 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 EPSTI1Q96J88 318 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 CCDC43Q96MW1 224 aaKnown RBP15.21■□□□□ 0.03
CPNE1-227ENST00000498056 PLIN2Q99541 437 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 TMEM106CQ9BVX2 250 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
CPNE1-227ENST00000498056 ATG7O95352 703 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 P4HBP07237 508 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 ASGR1P07306 291 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 GJB1P08034 283 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 STAT5BP51692 787 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 PSMC5P62195 406 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 RESP18Q5W5W9 173 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 ADALQ6DHV7 355 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 CXCL17Q6UXB2 119 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 TPH2Q8IWU9 490 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 PDILTQ8N807 584 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 ZNF579Q8NAF0 562 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 ARRDC4Q8NCT1 418 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 PCYT2Q99447 389 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 MMTAG2Q9BU76 263 aaKnown RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 SEPT9Q9UHD8 586 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-227ENST00000498056 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 SIP14410 1827 aa15.2■□□□□ 0.02
CPNE1-227ENST00000498056 IGKV6D-21A0A0A0MT36 114 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 DNM1LO00429 736 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 DKC1O60832 514 aaKnown RBP eCLIP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 LGR5O75473 907 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 F2P00734 622 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 TFRCP02786 760 aaKnown RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 OATP04181 439 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 PFKFB1P16118 471 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 PLCG1P19174 1290 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 RPA1P27694 616 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 ACLYP53396 1101 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 PURAQ00577 322 aaKnown RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 KCNA10Q16322 511 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 CCDC73Q6ZRK6 1079 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 KLHDC9Q8NEP7 349 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 AFAP1L1Q8TED9 768 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 SMARCAD1Q9H4L7 1026 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 DDX19AQ9NUU7 478 aaKnown RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 ERAP1Q9NZ08 941 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 WRAP73Q9P2S5 460 aaPredicted RBP15.19■□□□□ 0.02
CPNE1-227ENST00000498056 CCDC39Q9UFE4 941 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 OGDHLQ9ULD0 1010 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 TRPC6Q9Y210 931 aa15.19■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 MOXD2PA6NHM9 499 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 H3BRB1 525 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 KPNA6O60684 536 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-227ENST00000498056 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms