RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ANKRD35Q8N283 1001 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 NSUN6Q8TEA1 469 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 NOC3LQ8WTT2 800 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 HPS3Q969F9 1004 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 GPRASP2Q96D09 838 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 DNAJC19Q96DA6 116 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 MS4A4AQ96JQ5 239 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 CCDC43Q96MW1 224 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 ZNF830Q96NB3 372 aaPredicted RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 CTAGE1Q96RT6 745 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 REEP2Q9BRK0 252 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 SPATC1LQ9H0A9 340 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 BHMT2Q9H2M3 363 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 ZHX3Q9H4I2 956 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 THAP9Q9H5L6 903 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 INTS13Q9NVM9 706 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 RGL1Q9NZL6 768 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 BTBD7Q9P203 1132 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 MAGEC2Q9UBF1 373 aaPredicted RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 NRBP1Q9UHY1 535 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 FRMPD3Q5JV73 1810 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 NPHP3-ACAD11A0A0J9YXS1 232 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 A0A1B0GTH6 734 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 FRMD3A2A2Y4 597 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 WDR64B1ANS9 1081 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 NRDCO43847 1150 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 STAM2O75886 525 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 NR3C2P08235 984 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 SFPQP23246 707 aaKnown RBP eCLIP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 ALDH5A1P51649 535 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 PMS1P54277 932 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 PSMC6P62333 389 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 KRT76Q01546 638 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 EHHADHQ08426 723 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 RAD51AP2Q09MP3 1159 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 STK4Q13043 487 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 PSMD2Q13200 908 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 KRT31Q15323 416 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 GNPTABQ3T906 1256 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 LDLRAD1Q5T700 205 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 TTI2Q6NXR4 508 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 B3GNT9Q6UX72 402 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 NCAPG2Q86XI2 1143 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 SFR1Q86XK3 245 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 TPH2Q8IWU9 490 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 GUF1Q8N442 669 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 SYT2Q8N9I0 419 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 CDHR1Q96JP9 859 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 CNOT6LQ96LI5 555 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 TSG101Q99816 390 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 GBA2Q9HCG7 927 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 TBC1D22BQ9NU19 505 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 TAB2Q9NYJ8 693 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
PDZRN3-212ENST00000498048 PDCD11Q14690 1871 aaKnown RBP8.96□□□□□ -0.97
PDZRN3-212ENST00000498048 ARHGEF35A5YM69 484 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 UNCXA6NJT0 531 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 PEX10O60683 326 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 CNMDO75829 334 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 FAM13AO94988 1023 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 KIF20AO95235 890 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 SLC25A27O95847 323 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 TPM2P07951 284 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 GAP43P17677 238 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 EEF1GP26641 437 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 SFNP31947 248 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 COPB1P53618 953 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 FKBP1BP68106 108 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 LRRC63Q05C16 580 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 LRMPQ12912 555 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 MOGSQ13724 837 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 TCP11X2Q5H9J9 407 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 MYOCDQ8IZQ8 938 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 CSGALNACT2Q8N6G5 542 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 DNERQ8NFT8 737 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 RDM1Q8NG50 284 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 PIGOQ8TEQ8 1089 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 INPP4AQ96PE3 977 aaPredicted RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 MOV10L1Q9BXT6 1211 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 TBC1D7Q9P0N9 293 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 PYCARDQ9ULZ3 195 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 CITO14578 2027 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 NFASCO94856 1347 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 UBE4BO95155 1302 aa8.96□□□□□ -0.98
PDZRN3-212ENST00000498048 CCL15-CCL14A0A0B4J2E2 113 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 RSPH10B2B2RC85 870 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 POTEB2H3BUK9 544 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 DHX15O43143 795 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ZNF500O60304 480 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 CELF2O95319 508 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 FGFR1OPO95684 399 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms