RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LRRC47Q8N1G4 583 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 AFAP1L2Q8N4X5 818 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 UBR7Q8N806 425 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 TDRD7Q8NHU6 1098 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 GATAD2BQ8WXI9 593 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 KIF2CQ99661 725 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 RUSC1Q9BVN2 902 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 SPATA9Q9BWV2 254 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 ASPSCR1Q9BZE9 553 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 CD209Q9NNX6 404 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 CHST12Q9NRB3 414 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 CNOT7Q9UIV1 285 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 PHIPQ8WWQ0 1821 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 GSG1L2A8MUP6 293 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 H7C1D1 291 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 EYA2O00167 538 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 KATNA1O75449 491 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 PDE8BO95263 885 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 F13A1P00488 732 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 IGHA1P01876 353 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 GNAI3P08754 354 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 CELA3AP09093 270 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 FAM153BP0C7A2 387 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 UBTFL1P0CB47 393 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 BDNFP23560 247 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 KLRK1P26718 216 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 CHRNA4P43681 627 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 PIN1Q13526 163 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 MORC3Q14149 939 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 GFOD2Q3B7J2 385 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 HGSNATQ68CP4 663 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 NXNQ6DKJ4 435 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 ATG9AQ7Z3C6 839 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 TCEAL8Q8IYN2 117 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 GPR101Q96P66 508 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 MEIS3Q99687 375 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 CDH19Q9H159 772 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 MIR1-1HGQ9H1L0 117 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 CASS4Q9NQ75 786 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 ATAD5Q96QE3 1844 aa7.04□□□□□ -1.28
TMEM39A-212ENST00000497993 CASP8AP2Q9UKL3 1982 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 SASH1O94885 1247 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 IFIT2P09913 472 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 MAN1A1P33908 653 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 KIF4BQ2VIQ3 1234 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 FAM102BQ5T8I3 360 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 ZKSCAN2Q63HK3 967 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 GK5Q6ZS86 529 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 CDC37L1Q7L3B6 337 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 ZNF804AQ7Z570 1209 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 CHMP4CQ96CF2 233 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 MRIQ9BWK5 157 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 PUS3Q9BZE2 481 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 EPN3Q9H201 632 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 JADE2Q9NQC1 790 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 AASDHPPTQ9NRN7 309 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 TNNQ9UQP3 1299 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 DDX60LQ5H9U9 1706 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 RPAP1Q9BWH6 1393 aaPredicted RBP7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 SIPA1L1O43166 1804 aa7.03□□□□□ -1.28
TMEM39A-212ENST00000497993 SALL1Q9NSC2 1324 aa7.02□□□□□ -1.28
TMEM39A-212ENST00000497993 MYH1P12882 1939 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MYH8P13535 1937 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 DNAJC25-GNG10A0A024R161 153 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 ITGB2P05107 769 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 CYP11A1P05108 521 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 FKBP1BP68106 108 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 PURAQ00577 322 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 GSTM4Q03013 218 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 PPP2R3AQ06190 1150 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MLC1Q15049 377 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 PUM3Q15397 648 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 DUOXA2Q1HG44 320 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 GRAMD1BQ3KR37 738 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 LRRC24Q50LG9 513 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 FNDC3BQ53EP0 1204 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 C10orf62Q5T681 223 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 CST9Q5W186 159 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MAP1SQ66K74 1059 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 BNC2Q6ZN30 1099 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 REC114Q7Z4M0 266 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 DGKHQ86XP1 1220 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 CERS5Q8N5B7 392 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 FBXO27Q8NI29 283 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 FAM84BQ96KN1 310 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MTA3Q9BTC8 594 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 MYOZ2Q9NPC6 264 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 CNNM1Q9NRU3 951 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 SLC5A4Q9NY91 659 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 KCNK4Q9NYG8 393 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 INTUQ9ULD6 942 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 SAMM50Q9Y512 469 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 LRRFIP2Q9Y608 721 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
TMEM39A-212ENST00000497993 DOCK1Q14185 1865 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms