RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 JPH1Q9HDC5 661 aaPredicted RBP13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 KCNH7Q9NS40 1196 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 RRN3P2A6NIE6 340 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 STXBP3O00186 592 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 LPXNO60711 386 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 RPLP2P05387 115 aaKnown RBP13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 HTRA4P83105 476 aaPredicted RBP13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 TFF2Q03403 129 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 FUT2Q10981 343 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 AP3B2Q13367 1082 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 GRIK4Q16099 956 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 FBXO22Q8NEZ5 403 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 TOP1MTQ969P6 601 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 SAMD11Q96NU1 681 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 BARHL2Q9NY43 387 aa13.43□□□□□ -0.26
NUDCD3-211ENST00000497978 NFASCO94856 1347 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 SIP14410 1827 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 UPP2O95045 317 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 CHRNA1P02708 482 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 ZNF76P36508 570 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 RUFY4Q6ZNE9 571 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 COL4A4P53420 1690 aaPredicted RBP13.42□□□□□ -0.26
NUDCD3-211ENST00000497978 MBLAC1A4D2B0 266 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 GHRP10912 638 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 BMP1P13497 986 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 CDC27P30260 824 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 KCNQ1P51787 676 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 ACTR2P61160 394 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 IGBP1P78318 339 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 PTPROQ16827 1216 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 TYW1BQ6NUM6 668 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 CYP2W1Q8TAV3 490 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 DNAJB3Q8WWF6 145 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 JAKMIP1Q96N16 626 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 C17orf80Q9BSJ5 609 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
NUDCD3-211ENST00000497978 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 M0QZ92 97 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 STK25O00506 426 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 ARP10275 920 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 INSRRP14616 1297 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 SREBF1P36956 1147 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 STAT5BP51692 787 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 MGAT3Q09327 533 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 EPC2Q52LR7 807 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 IER5Q5VY09 327 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 Q6ZUG5 572 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 NIPA1Q7RTP0 329 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 PCYT2Q99447 389 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 AGO4Q9HCK5 861 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 CDY2AQ9Y6F7 541 aa13.4□□□□□ -0.26
NUDCD3-211ENST00000497978 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.27
NUDCD3-211ENST00000497978 TTC28Q96AY4 2481 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 MEIS1O00470 390 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 REC8O95072 547 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 SCG2P13521 617 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 PSMA5P28066 241 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 HSPA4P34932 840 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 SLC26A2P50443 739 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 MRPS6P82932 125 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 LPIN1Q14693 890 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 FAM160B1Q5W0V3 765 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 TSHZ1Q6ZSZ6 1077 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 KCNB2Q92953 911 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 BRF1Q92994 677 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 FAM49AQ9H0Q0 323 aaPredicted RBP13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
NUDCD3-211ENST00000497978 ESYT2A0FGR8 921 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms