RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 SESTD1Q86VW0 696 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 TRIOBPQ9H2D6 2365 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 CYP3A7-CYP3A51PA0A087WV96 503 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 CCDC194A0A1B0GVG4 234 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
ERCC8-208ENST00000497892 CYP3A7P24462 503 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
ERCC8-208ENST00000497892 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
ERCC8-208ENST00000497892 INF2Q27J81 1249 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 KIAA0753Q2KHM9 967 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 FAM47CQ5HY64 1035 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 KRT40Q6A162 431 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 MOXD1Q6UVY6 613 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
ERCC8-208ENST00000497892 MBOAT7Q96N66 472 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 GDF15Q99988 308 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TRMT13Q9NUP7 481 aaKnown RBP12.76□□□□□ -0.37
ERCC8-208ENST00000497892 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
ERCC8-208ENST00000497892 GSTTP1A0A1W2PQM5 241 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 H3BRB1 525 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 DHX15O43143 795 aaKnown RBP12.75□□□□□ -0.37
ERCC8-208ENST00000497892 TDP2O95551 362 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 ITGB8P26012 769 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 NR5A1Q13285 461 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 EMSYQ7Z589 1322 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 DIS3L2Q8IYB7 885 aaKnown RBP12.75□□□□□ -0.37
ERCC8-208ENST00000497892 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 C8orf76Q96K31 380 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 EPAS1Q99814 870 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 ZNF577Q9BSK1 485 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 TUT1Q9H6E5 874 aaKnown RBP12.75□□□□□ -0.37
ERCC8-208ENST00000497892 TBC1D22BQ9NU19 505 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
ERCC8-208ENST00000497892 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
ERCC8-208ENST00000497892 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 CCNE2O96020 404 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 RAG1P15918 1043 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
ERCC8-208ENST00000497892 PTPN5P54829 565 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 ACTR2P61160 394 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 MDM2Q00987 491 aaPredicted RBP12.74□□□□□ -0.37
ERCC8-208ENST00000497892 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 Q4G0T1 1027 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
ERCC8-208ENST00000497892 UTP14CQ5TAP6 766 aaKnown RBP12.74□□□□□ -0.37
ERCC8-208ENST00000497892 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 LBHD1Q9BQE6 289 aaPredicted RBP12.74□□□□□ -0.37
ERCC8-208ENST00000497892 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
ERCC8-208ENST00000497892 TRIP12Q14669 1992 aaPredicted RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 MSH4O15457 936 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 LGR5O75473 907 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 ATG7O95352 703 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 TIMP1P01033 207 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 HOXC8P31273 242 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 BMP8BP34820 402 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 GUCY1B3Q02153 619 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 PTGISQ16647 500 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 LETM2Q2VYF4 491 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 PPP4R3AQ6IN85 833 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 BADQ92934 168 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 WNT2BQ93097 391 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 RIT2Q99578 217 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 ERAP1Q9NZ08 941 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
ERCC8-208ENST00000497892 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
ERCC8-208ENST00000497892 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 SLC37A4O43826 429 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms