RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 DGKIO75912 1065 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 DDAH1O94760 285 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 KIF5BP33176 963 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 BTG3Q14201 252 aaPredicted RBP25■■□□□ 1.59
CLIC4-204ENST00000497755 MAP4K1Q92918 833 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 LZTS2Q9BRK4 669 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 AGO3Q9H9G7 860 aaKnown RBP25■■□□□ 1.59
CLIC4-204ENST00000497755 SEC63Q9UGP8 760 aaKnown RBP25■■□□□ 1.59
CLIC4-204ENST00000497755 CDY2AQ9Y6F7 541 aa25■■□□□ 1.59
CLIC4-204ENST00000497755 PLEKHA8P1O95397 391 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 GTF2F1P35269 517 aaKnown RBP eCLIP24.99■■□□□ 1.592e-13■■■■■ 29.2
CLIC4-204ENST00000497755 IRS1P35568 1242 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 CAMK1Q14012 370 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 SMAD2Q15796 467 aaKnown RBP24.99■■□□□ 1.59
CLIC4-204ENST00000497755 CLUL1Q15846 466 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 TSHZ1Q6ZSZ6 1077 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 RTN4RL1Q86UN2 441 aaPredicted RBP24.99■■□□□ 1.59
CLIC4-204ENST00000497755 ALYREFQ86V81 257 aaKnown RBP24.99■■□□□ 1.59
CLIC4-204ENST00000497755 CMTR1Q8N1G2 835 aaKnown RBP24.99■■□□□ 1.59
CLIC4-204ENST00000497755 CRIPAKQ8N1N5 446 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 GLG1Q92896 1179 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 ZBTB10Q96DT7 871 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 SMARCAD1Q9H4L7 1026 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 UBIAD1Q9Y5Z9 338 aa24.99■■□□□ 1.59
CLIC4-204ENST00000497755 LINC01599Q8WXQ3 324 aa24.98■■□□□ 1.59
CLIC4-204ENST00000497755 PLVAPQ9BX97 442 aa24.98■■□□□ 1.59
CLIC4-204ENST00000497755 ALG13Q9NP73 1137 aaKnown RBP24.98■■□□□ 1.59
CLIC4-204ENST00000497755 PKD2L1Q9P0L9 805 aa24.98■■□□□ 1.59
CLIC4-204ENST00000497755 PLAGL2Q9UPG8 496 aa24.98■■□□□ 1.59
CLIC4-204ENST00000497755 MBTPS2O43462 519 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 CD52P31358 61 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 GNAQP50148 359 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 MRPS6P82932 125 aaKnown RBP24.97■■□□□ 1.59
CLIC4-204ENST00000497755 MTMR1Q13613 665 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 PCYT2Q99447 389 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 UPF3BQ9BZI7 483 aaKnown RBP24.97■■□□□ 1.59
CLIC4-204ENST00000497755 IGFLR1Q9H665 355 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 JADE2Q9NQC1 790 aa24.97■■□□□ 1.59
CLIC4-204ENST00000497755 ZNF318Q5VUA4 2279 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 LINC01565O15544 149 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 MMP1P03956 469 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 INSRRP14616 1297 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 IGBP1P78318 339 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 ADAM15Q13444 863 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 COL9A3Q14050 684 aaPredicted RBP24.96■■□□□ 1.59
CLIC4-204ENST00000497755 UBE2SQ16763 222 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 MTA3Q9BTC8 594 aa24.96■■□□□ 1.59
CLIC4-204ENST00000497755 RBM8AQ9Y5S9 174 aaKnown RBP24.96■■□□□ 1.59
CLIC4-204ENST00000497755 RRN3P2A6NIE6 340 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 MAFGO15525 162 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 PRC1O43663 620 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 TBX10O75333 385 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 CSPG5O95196 566 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 DNAJB1P25685 340 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 TMTC2Q8N394 836 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 FAM49AQ9H0Q0 323 aaPredicted RBP24.95■■□□□ 1.58
CLIC4-204ENST00000497755 PCDHA6Q9UN73 950 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 PCDHA8Q9Y5H6 950 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 MRPL42Q9Y6G3 142 aaKnown RBP24.95■■□□□ 1.58
CLIC4-204ENST00000497755 SQORQ9Y6N5 450 aa24.95■■□□□ 1.58
CLIC4-204ENST00000497755 hCG_1642624A0A1W2PR95 340 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 RXRAP19793 462 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 IER5Q5VY09 327 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 CASC1Q6TDU7 716 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 P2RX5Q93086 422 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 LOXHD1Q8IVV2 1947 aa24.94■■□□□ 1.58
CLIC4-204ENST00000497755 SH2B2O14492 632 aaPredicted RBP24.93■■□□□ 1.58
CLIC4-204ENST00000497755 ITGB1P05556 798 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 SMAD4Q13485 552 aaKnown RBP24.93■■□□□ 1.58
CLIC4-204ENST00000497755 NFXL1Q6ZNB6 911 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 HFE2Q6ZVN8 426 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 CMTR2Q8IYT2 770 aaKnown RBP24.93■■□□□ 1.58
CLIC4-204ENST00000497755 SPPL3Q8TCT6 385 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 FBXL18Q96ME1 805 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 FTHL17Q9BXU8 183 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 CD207Q9UJ71 328 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 PADI3Q9ULW8 664 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 TECTAO75443 2155 aa24.93■■□□□ 1.58
CLIC4-204ENST00000497755 CCDC69A6NI79 296 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 SPDYE3A6NKU9 549 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 RPLP2P05387 115 aaKnown RBP24.92■■□□□ 1.58
CLIC4-204ENST00000497755 MCM5P33992 734 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 TMEM62Q0P6H9 643 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 NAALADL2Q58DX5 795 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 HERC4Q5GLZ8 1057 aaPredicted RBP24.92■■□□□ 1.58
CLIC4-204ENST00000497755 RNF135Q8IUD6 432 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 NPAS4Q8IUM7 802 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 CCDC82Q8N4S0 544 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 TMEM87BQ96K49 555 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 MSLNLQ96KJ4 702 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 POP1Q99575 1024 aaKnown RBP24.92■■□□□ 1.58
CLIC4-204ENST00000497755 KCNH6Q9H252 994 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 JPH1Q9HDC5 661 aaPredicted RBP24.92■■□□□ 1.58
CLIC4-204ENST00000497755 MUTYHQ9UIF7 546 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 PCDHA2Q9Y5H9 948 aa24.92■■□□□ 1.58
CLIC4-204ENST00000497755 NHLH1Q02575 133 aa24.91■■□□□ 1.58
CLIC4-204ENST00000497755 KLHL23Q8NBE8 558 aa24.91■■□□□ 1.58
CLIC4-204ENST00000497755 CYP2W1Q8TAV3 490 aa24.91■■□□□ 1.58
CLIC4-204ENST00000497755 KCNH7Q9NS40 1196 aa24.91■■□□□ 1.58
CLIC4-204ENST00000497755 SLC9A2Q9UBY0 812 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms