RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 MIER3Q7Z3K6 550 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.28■□□□□ 0.52
FAM3A-220ENST00000497506 TRMT13Q9NUP7 481 aaKnown RBP18.28■□□□□ 0.52
FAM3A-220ENST00000497506 GTF2IRD1Q9UHL9 959 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
FAM3A-220ENST00000497506 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
FAM3A-220ENST00000497506 KAT6AQ92794 2004 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.52
FAM3A-220ENST00000497506 CLTBP09497 229 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 ATP4AP20648 1035 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 MARK3P27448 753 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 HOXC8P31273 242 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 TXKP42681 527 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 FAM160B1Q5W0V3 765 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 CTAGE1Q96RT6 745 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 TTC12Q9H892 705 aaPredicted RBP18.27■□□□□ 0.52
FAM3A-220ENST00000497506 GABBR1Q9UBS5 961 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 PCDHA12Q9UN75 941 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 SAMM50Q9Y512 469 aa18.27■□□□□ 0.52
FAM3A-220ENST00000497506 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 OR52Z1P0C646 297 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 SLC26A2P50443 739 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 ZNF200P98182 395 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-220ENST00000497506 PTGDRQ13258 359 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 UGCGQ16739 394 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 PDXDC2PQ6P474 469 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 TRIM43Q96BQ3 446 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-220ENST00000497506 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 TBX21Q9UL17 535 aa18.26■□□□□ 0.51
FAM3A-220ENST00000497506 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-220ENST00000497506 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 H0YGN5 161 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 KIAA0355O15063 1070 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 PDIA4P13667 645 aaKnown RBP18.25■□□□□ 0.51
FAM3A-220ENST00000497506 SYN1P17600 705 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 PTGISQ16647 500 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 PRDM5Q9NQX1 630 aaPredicted RBP18.25■□□□□ 0.51
FAM3A-220ENST00000497506 TMEM39AQ9NV64 488 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 SETD4Q9NVD3 440 aa18.25■□□□□ 0.51
FAM3A-220ENST00000497506 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 MYH15Q9Y2K3 1946 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 POTEB3A0JP26 581 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 C17orf102A2RUQ5 167 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 ZNF862O60290 1169 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 ITGB8P26012 769 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 ADAM17P78536 824 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 PKP1Q13835 747 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 EPHA7Q15375 998 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 NCAPH2Q6IBW4 605 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 POTEBQ6S5H4 581 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 ATP8B4Q8TF62 1192 aa18.24■□□□□ 0.51
FAM3A-220ENST00000497506 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-220ENST00000497506 NRCAMQ92823 1304 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 LAD1O00515 517 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
FAM3A-220ENST00000497506 CYP2C9P11712 490 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 INSRRP14616 1297 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 MARCH8Q5T0T0 291 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 LMBR1Q8WVP7 490 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
FAM3A-220ENST00000497506 POTEMA6NI47 508 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 TREHO43280 583 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 HBP1O60381 514 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 STBD1O95210 358 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 P4HBP07237 508 aaKnown RBP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 PRPHP41219 470 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 TECP42680 631 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 ATP2C1P98194 919 aaPredicted RBP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 GRIK4Q16099 956 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 IL17AQ16552 155 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 BANK1Q8NDB2 785 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 ATP6V0A1Q93050 837 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 NOC4LQ9BVI4 516 aaKnown RBP18.22■□□□□ 0.51
FAM3A-220ENST00000497506 RGL1Q9NZL6 768 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 PRKAG2Q9UGJ0 569 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
FAM3A-220ENST00000497506 MBLAC1A4D2B0 266 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 RRN3P2A6NIE6 340 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 ZBTB42B2RXF5 422 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 TIMP1P01033 207 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 OATP04181 439 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 GNAT1P11488 350 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 QARSP47897 775 aaKnown RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 PSMC5P62195 406 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 PRKCEQ02156 737 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 PTK7Q13308 1070 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms