RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZBTB10Q96DT7 871 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 ACAP3Q96P50 834 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 SEC62Q99442 399 aaKnown RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 LRFN3Q9BTN0 628 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 BOCQ9BWV1 1114 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 TBC1D22BQ9NU19 505 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 TUBD1Q9UJT1 453 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 NESP48681 1621 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 LOC100289279A0A1B0GTE1 492 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 CAPN8A6NHC0 703 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 RHPN2P1A8MT19 583 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 FAM155AB1AL88 458 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 KPNA5O15131 536 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 MGEA5O60502 916 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 MAFKO60675 156 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 SLC9A1P19634 815 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 HTR1BP28222 390 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ADH7P40394 386 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ST5P78524 1137 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ALDH6A1Q02252 535 aaKnown RBP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PGS1Q32NB8 556 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 UAP1L1Q3KQV9 507 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ANO6Q4KMQ2 910 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 FAM209BQ5JX69 171 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 SPECC1Q5M775 1068 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PSAPL1Q6NUJ1 521 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 MAP4K3Q8IVH8 894 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 CCDC103Q8IW40 242 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PANK1Q8TE04 598 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 XAGE3Q8WTP9 111 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 USP13Q92995 863 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PHKBQ93100 1093 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PPP1R16BQ96T49 567 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ELF4Q99607 663 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-224ENST00000497488 MCMBPQ9BTE3 642 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 CENPOQ9BU64 300 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 SLC26A6Q9BXS9 759 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PRDM14Q9GZV8 571 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 IPPKQ9H8X2 491 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PPP1R9AQ9ULJ8 1098 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 CEP131Q9UPN4 1083 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 PHF24Q9UPV7 400 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 ERBB4Q15303 1308 aa7.18□□□□□ -1.26
BRCA1-224ENST00000497488 BICDL2A1A5D9 508 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 LCHNA4D1U4 455 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 KRT37O76014 449 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 DLGAP3O95886 979 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 CSTBP04080 98 aaKnown RBP7.17□□□□□ -1.26
BRCA1-224ENST00000497488 DHRS4L1P0CG22 281 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 ZBTB48P10074 688 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-224ENST00000497488 BAG6P46379 1132 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 POLD3Q15054 466 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-224ENST00000497488 ZNF174Q15697 407 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 AGAP9Q5VTM2 703 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 E4F1Q66K89 784 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-224ENST00000497488 SWSAP1Q6NVH7 229 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 FRMD7Q6ZUT3 714 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 KIAA1958Q8N8K9 716 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 HDAC2Q92769 488 aaKnown RBP7.17□□□□□ -1.26
BRCA1-224ENST00000497488 DDX11Q96FC9 970 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 KLHDC7BQ96G42 594 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 TRIM47Q96LD4 638 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 CARD10Q9BWT7 1032 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 ASPNQ9BXN1 380 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 FOXQ1Q9C009 403 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 BTBD1Q9H0C5 482 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 GPRC5CQ9NQ84 441 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 STARD7Q9NQZ5 370 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 SMYD2Q9NRG4 433 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 TOMM22Q9NS69 142 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 CBLCQ9ULV8 474 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 PADI4Q9UM07 663 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 TMX2Q9Y320 296 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 TTLL3Q9Y4R7 772 aa7.17□□□□□ -1.26
BRCA1-224ENST00000497488 C11orf95C9JLR9 678 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-224ENST00000497488 STXBP3O00186 592 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 ADAMTS3O15072 1205 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 DTNBO60941 627 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 TMCC2O75069 709 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 ALDH2P05091 517 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 OSMP13725 252 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 LCP1P13796 627 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 TECP42680 631 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 PCBP4P57723 403 aaKnown RBP7.16□□□□□ -1.26
BRCA1-224ENST00000497488 LACTBP83111 547 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-224ENST00000497488 KCNAB2Q13303 367 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 SNW1Q13573 536 aaKnown RBP7.16□□□□□ -1.26
BRCA1-224ENST00000497488 HSF5Q4G112 596 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-224ENST00000497488 TOR2AQ5JU69 321 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 SPATA1Q5VX52 437 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 PGBD2Q6P3X8 592 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 C4orf50Q6ZRC1 276 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 COA7Q96BR5 231 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 TMEM41AQ96HV5 264 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms