RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 FUT2Q10981 343 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
SCNM1-206ENST00000497147 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
SCNM1-206ENST00000497147 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 HSCBQ8IWL3 235 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 DBF4BQ8NFT6 615 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 AFG1LQ8WV93 481 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
SCNM1-206ENST00000497147 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 GTF2IRD1Q9UHL9 959 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
SCNM1-206ENST00000497147 PCDHA1Q9Y5I3 950 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
SCNM1-206ENST00000497147 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 PROB1E7EW31 1015 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 H0Y858 1186 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 PRPF3O43395 683 aaKnown RBP11.22□□□□□ -0.61
SCNM1-206ENST00000497147 NCK2O43639 380 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
SCNM1-206ENST00000497147 DEXIO95424 95 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 MMP3P08254 477 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 AVPR2P30518 371 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 PLXNA3P51805 1871 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 PDE4DQ08499 809 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 COL4A6Q14031 1691 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 HIC1Q14526 733 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 NTRK3Q16288 839 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
SCNM1-206ENST00000497147 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 ERMP1Q7Z2K6 904 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 TMX3Q96JJ7 454 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 YME1L1Q96TA2 773 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
SCNM1-206ENST00000497147 FRYLO94915 3013 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 GRM6O15303 877 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 RGS20O76081 388 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 SCG2P13521 617 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 CALML3P27482 149 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 NAPAP54920 295 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 PTK7Q13308 1070 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 PFKFB3Q16875 520 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 CCDC12Q8WUD4 166 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 WASF1Q92558 559 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 TOP1MTQ969P6 601 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 MSLNLQ96KJ4 702 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 LLPHQ9BRT6 129 aaKnown RBP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-206ENST00000497147 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
SCNM1-206ENST00000497147 ZNF292O60281 2723 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 STK36Q9NRP7 1315 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 ATG2AQ2TAZ0 1938 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-206ENST00000497147 PRR23AA6NEV1 266 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 UPP2O95045 317 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 EYA4O95677 639 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 XBP1P17861 261 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 SIGLEC14Q08ET2 396 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 ADAM15Q13444 863 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 CBX2Q14781 532 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-206ENST00000497147 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 PLEKHG4Q58EX7 1191 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 WWC2Q6AWC2 1192 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-206ENST00000497147 C7orf31Q8N865 590 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 CUL5Q93034 780 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 SNX21Q969T3 373 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 MPHOSPH6Q99547 160 aaKnown RBP11.2□□□□□ -0.62
SCNM1-206ENST00000497147 IGFLR1Q9H665 355 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
SCNM1-206ENST00000497147 MICAL3Q7RTP6 2002 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-206ENST00000497147 HAS3O00219 553 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 CFBP00751 764 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
SCNM1-206ENST00000497147 PSEN2P49810 448 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 RPS6P62753 249 aaKnown RBP11.19□□□□□ -0.62
SCNM1-206ENST00000497147 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
SCNM1-206ENST00000497147 CAMK1Q14012 370 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 NSUN7Q8NE18 718 aaKnown RBP11.19□□□□□ -0.62
SCNM1-206ENST00000497147 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 ALG1Q9BT22 464 aa11.19□□□□□ -0.62
SCNM1-206ENST00000497147 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms