RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CENPPQ6IPU0 288 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 PI16Q6UXB8 463 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 PRCCQ92733 491 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 FMO2Q99518 471 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 RNPEPL1Q9HAU8 725 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 RPL26L1Q9UNX3 145 aaKnown RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 BCORQ6W2J9 1755 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 LAD1O00515 517 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 DAPK3O43293 454 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 ATP5HO75947 161 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 CALB2P22676 271 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 MCM7P33993 719 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 PLS1Q14651 629 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 CNBD1Q8NA66 436 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 EPAS1Q99814 870 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 C7orf25Q9BPX7 421 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 PIH1D3Q9NQM4 214 aaKnown RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 ARL2BPQ9Y2Y0 163 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 DOCK2Q92608 1830 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 FLT3P36888 993 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.155e-7■■■□□ 16.8
VEGFA-215ENST00000497139 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 TBC1D16Q8TBP0 767 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 NEK9Q8TD19 979 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 C2CD2Q9Y426 696 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 MYH1P12882 1939 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 RGS16O15492 202 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 PCCAP05165 728 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 UQCRFS1P1P0C7P4 283 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 KCNA4P22459 653 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 MAGEA8P43361 318 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 PDE4DQ08499 809 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 MKRN3Q13064 507 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 LRRC23Q53EV4 343 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 DTHD1Q6ZMT9 781 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 ATL2Q8NHH9 583 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 RBM41Q96IZ5 413 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 TTC7AQ9ULT0 858 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 DLEC1Q9Y238 1755 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 GLI3P10071 1580 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 KRIT1O00522 736 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 CEP104O60308 925 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 CALML3P27482 149 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 UBA7P41226 1012 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 AMPD3Q01432 767 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 LRRC63Q05C16 580 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 DENND2CQ68D51 928 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 IRGCQ6NXR0 463 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.153e-7■■■■■ 32.5
VEGFA-215ENST00000497139 ENDOVQ8N8Q3 282 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 PRMT1Q99873 361 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 ZMYND12Q9H0C1 365 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 TXLNGQ9NUQ3 528 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 NOC2LQ9Y3T9 749 aaKnown RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 RPS6KL1Q9Y6S9 549 aa14.14□□□□□ -0.15
VEGFA-215ENST00000497139 V9GY48 417 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-215ENST00000497139 ITGA6P23229 1130 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 RXRBP28702 533 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 PCK1P35558 622 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 HSPA2P54652 639 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 TNFAIP8L3Q5GJ75 292 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 PPP1R15BQ5SWA1 713 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 PIK3AP1Q6ZUJ8 805 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 AK8Q96MA6 479 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 GSG1L2A8MUP6 293 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 DDAH1O94760 285 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 ZBTB48P10074 688 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-215ENST00000497139 ADAM9Q13443 819 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 CLUL1Q15846 466 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 STK32AQ8WU08 396 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 ESR2Q92731 530 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 ZKSCAN3Q9BRR0 538 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 PLA2G12BQ9BX93 195 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 TRIM9Q9C026 710 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 CTTNBP2NLQ9P2B4 639 aa14.13□□□□□ -0.15
VEGFA-215ENST00000497139 PRDM1O75626 825 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 PDE6BP35913 854 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 TRIM74Q86UV6 250 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 TRIM73Q86UV7 250 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 AGGF1Q8N302 714 aaeCLIP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 SLC4A4Q9Y6R1 1079 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 TNKSO95271 1327 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 ZPR1O75312 459 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 LMNAP02545 664 aaKnown RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 SP100P23497 879 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 ANXA13P27216 316 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms