RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 DKC1O60832 514 aaKnown RBP eCLIP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 MYL3P08590 195 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 STAT5BP51692 787 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 KCNA10Q16322 511 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 ADALQ6DHV7 355 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 CCSAPQ6IQ19 270 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 PLPPR4Q7Z2D5 763 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 CCDC60Q8IWA6 550 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 AFAP1L1Q8TED9 768 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 SNX29Q8TEQ0 813 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 GLG1Q92896 1179 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 HSD17B14Q9BPX1 270 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 POLR3CQ9BUI4 534 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 GABBR1Q9UBS5 961 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 MOXD2PA6NHM9 499 aa24.41■■□□□ 1.5
C9orf3-222ENST00000496567 RPA1P27694 616 aa24.41■■□□□ 1.5
C9orf3-222ENST00000496567 TXLNAP40222 546 aa24.41■■□□□ 1.5
C9orf3-222ENST00000496567 QARSP47897 775 aaKnown RBP24.41■■□□□ 1.5
C9orf3-222ENST00000496567 DYDC2Q96IM9 177 aa24.41■■□□□ 1.5
C9orf3-222ENST00000496567 TUFT1Q9NNX1 390 aa24.41■■□□□ 1.5
C9orf3-222ENST00000496567 ZNF215Q9UL58 517 aaPredicted RBP24.41■■□□□ 1.5
C9orf3-222ENST00000496567 GOLGA6L4A6NEF3 574 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 PP2D1A8MPX8 630 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 DNM1LO00429 736 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 SLC26A4O43511 780 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 ASGR1P07306 291 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 MUTP22033 750 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 CDC25AP30304 524 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 CCT6AP40227 531 aaKnown RBP24.4■■□□□ 1.5
C9orf3-222ENST00000496567 SLC26A2P50443 739 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 PSMC5P62195 406 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 PURAQ00577 322 aaKnown RBP24.4■■□□□ 1.5
C9orf3-222ENST00000496567 PDXDC2PQ6P474 469 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 CABP7Q86V35 215 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 TMEM87AQ8NBN3 555 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 PCYT2Q99447 389 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 C16orf70Q9BSU1 422 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 RGL1Q9NZL6 768 aa24.4■■□□□ 1.5
C9orf3-222ENST00000496567 MAFBQ9Y5Q3 323 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-222ENST00000496567 CABYRO75952 493 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 SLITRK3O94933 977 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 ZNF286BP0CG31 522 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 CYP4A11Q02928 519 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 SPECC1Q5M775 1068 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 BANK1Q8NDB2 785 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 SYMPKQ92797 1274 aaKnown RBP24.39■■□□□ 1.5
C9orf3-222ENST00000496567 LXNQ9BS40 222 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 MTG1Q9BT17 334 aaPredicted RBP24.39■■□□□ 1.5
C9orf3-222ENST00000496567 KATNAL1Q9BW62 490 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 CCSER1Q9C0I3 900 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 ZSWIM4Q9H7M6 989 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 ERAP1Q9NZ08 941 aa24.39■■□□□ 1.5
C9orf3-222ENST00000496567 IGSF9BQ9UPX0 1349 aa24.39■■□□□ 1.49
C9orf3-222ENST00000496567 KDM3AQ9Y4C1 1321 aa24.39■■□□□ 1.49
C9orf3-222ENST00000496567 H3BRB1 525 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 ACLYP53396 1101 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 CATSPER3Q86XQ3 398 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 TRIM50Q86XT4 487 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 TPH2Q8IWU9 490 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 ANKLE1Q8NAG6 615 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 CALML4Q96GE6 196 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 EPSTI1Q96J88 318 aa24.38■■□□□ 1.49
C9orf3-222ENST00000496567 MMTAG2Q9BU76 263 aaKnown RBP24.38■■□□□ 1.49
C9orf3-222ENST00000496567 TUT1Q9H6E5 874 aaKnown RBP24.38■■□□□ 1.49
C9orf3-222ENST00000496567 A0A1W2PQ27 194 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 A0A1W2PQ64 194 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 A0A1W2PQD8 194 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 GOLGA6L22H0YM25 854 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 MED24O75448 989 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 F2P00734 622 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 SPATA31C1P0DKV0 1188 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CTTNQ14247 550 aaKnown RBP24.37■■□□□ 1.49
C9orf3-222ENST00000496567 SHC4Q6S5L8 630 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CDK5RAP3Q96JB5 506 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 NT5C3AQ9H0P0 336 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 FAM13BQ9NYF5 915 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CMA1P23946 247 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 UGCGQ16739 394 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 RESP18Q5W5W9 173 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CXCL17Q6UXB2 119 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 C4orf19Q8IY42 314 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CKAP2LQ8IYA6 745 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 KCTD17Q8N5Z5 321 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 RASSF8Q8NHQ8 419 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 FAM167AQ96KS9 214 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 CCDC39Q9UFE4 941 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 PHF24Q9UPV7 400 aa24.37■■□□□ 1.49
C9orf3-222ENST00000496567 LYPLA2O95372 231 aa24.36■■□□□ 1.49
C9orf3-222ENST00000496567 MYH9P35579 1960 aaKnown RBP24.36■■□□□ 1.49
C9orf3-222ENST00000496567 HYIQ5T013 277 aa24.36■■□□□ 1.49
C9orf3-222ENST00000496567 USP49Q70CQ1 688 aa24.36■■□□□ 1.49
C9orf3-222ENST00000496567 KAT2BQ92831 832 aa24.36■■□□□ 1.49
C9orf3-222ENST00000496567 GLT1D1Q96MS3 346 aa24.36■■□□□ 1.49
C9orf3-222ENST00000496567 WDR81Q562E7 1941 aa24.35■■□□□ 1.49
C9orf3-222ENST00000496567 POTEB3A0JP26 581 aa24.35■■□□□ 1.49
C9orf3-222ENST00000496567 PRKCEQ02156 737 aa24.35■■□□□ 1.49
C9orf3-222ENST00000496567 ZRSR1Q15695 479 aaKnown RBP24.35■■□□□ 1.49
C9orf3-222ENST00000496567 POTEBQ6S5H4 581 aa24.35■■□□□ 1.49
C9orf3-222ENST00000496567 NRBP2Q9NSY0 501 aa24.35■■□□□ 1.49
C9orf3-222ENST00000496567 ZNF862O60290 1169 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms