RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 GJB4Q9NTQ9 266 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SLC9A2Q9UBY0 812 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MUC3AQ02505 3323 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 IGLV3-22A0A075B6J6 115 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 LARGE1O95461 756 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SEC24BO95487 1268 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PSMA5P28066 241 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZNF76P36508 570 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 KCNJ6P48051 423 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RCAN1P53805 252 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TAP1Q03518 808 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MARCH8Q5T0T0 291 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CRYGNQ8WXF5 182 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ARNTL2Q8WYA1 636 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SLC9A7Q96T83 725 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CYP46A1Q9Y6A2 500 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 C5orf42Q9H799 3197 aa13.24□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MEIS1O00470 390 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TLL1O43897 1013 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 LGR5O75473 907 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CHRNA1P02708 482 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GHRP10912 638 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 IFNAR1P17181 557 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 DNAJB3Q8WWF6 145 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PPP1R16BQ96T49 567 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 COL25A1Q9BXS0 654 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TUBE1Q9UJT0 475 aa13.23□□□□□ -0.29
HLA-DQA1-207ENST00000496318 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 BAIAP3O94812 1187 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 UPP2O95045 317 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 INSRRP14616 1297 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FOSBP53539 338 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 EVCP57679 992 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FBXL16Q8N461 479 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 LENG9Q96B70 501 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CDHR1Q96JP9 859 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TPCN1Q9ULQ1 816 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 KCNJ14Q9UNX9 436 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
HLA-DQA1-207ENST00000496318 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ESYT2A0FGR8 921 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MGAT3Q09327 533 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SCRN1Q12765 414 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 NPY5RQ15761 445 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PRR16Q569H4 304 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PLEKHG4Q58EX7 1191 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 C6orf50Q9HD87 102 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
HLA-DQA1-207ENST00000496318 NFASCO94856 1347 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 BACH1O14867 736 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 GJB5O95377 273 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 ATP4AP20648 1035 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 LPIN1Q14693 890 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 LINC01599Q8WXQ3 324 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 ZNF577Q9BSK1 485 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
HLA-DQA1-207ENST00000496318 ABHD14A-ACY1A0A1B0GW23 586 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 MBLAC1A4D2B0 266 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 LINC01553A4QN01 128 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 CHMP2AO43633 222 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 LPXNO60711 386 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 CSPG5O95196 566 aa13.19□□□□□ -0.3
HLA-DQA1-207ENST00000496318 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms