RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 TFF2Q03403 129 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 RESTQ13127 1097 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 PKP1Q13835 747 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 BECN1Q14457 450 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 NBR1Q14596 966 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 FERMT3Q86UX7 667 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 PCYT2Q99447 389 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
APTX-233ENST00000496030 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 TMEM60Q9H2L4 133 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 JPH1Q9HDC5 661 aaPredicted RBP13.46□□□□□ -0.25
APTX-233ENST00000496030 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 TMEM39AQ9NV64 488 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
APTX-233ENST00000496030 TBX3O15119 743 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 KPNA6O60684 536 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 MYL3P08590 195 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 ACTR2P61160 394 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 SP4Q02446 784 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 FAAP100Q0VG06 881 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
APTX-233ENST00000496030 ZNF174Q15697 407 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 DGKDQ16760 1214 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 FAM20AQ96MK3 541 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
APTX-233ENST00000496030 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 WDR81Q562E7 1941 aa13.45□□□□□ -0.26
APTX-233ENST00000496030 ELP1O95163 1332 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
APTX-233ENST00000496030 HAS3O00219 553 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 ZEB2O60315 1214 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 LGR5O75473 907 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 MCM7P33993 719 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 DDIT3P35638 169 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 CDK7P50613 346 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 KCNQ1P51787 676 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 PSMC6P62333 389 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 BRDTQ58F21 947 aaPredicted RBP13.44□□□□□ -0.26
APTX-233ENST00000496030 TMEM240Q5SV17 173 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 RASIP1Q5U651 963 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 ABHD15Q6UXT9 468 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 BRAPQ7Z569 592 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 SEPT1Q8WYJ6 367 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
APTX-233ENST00000496030 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
APTX-233ENST00000496030 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 CXXC1Q9P0U4 656 aaPredicted RBP13.44□□□□□ -0.26
APTX-233ENST00000496030 HCN4Q9Y3Q4 1203 aa13.44□□□□□ -0.26
APTX-233ENST00000496030 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
APTX-233ENST00000496030 NEMFO60524 1076 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 CABYRO75952 493 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 F2P00734 622 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 LGALS2P05162 132 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 ZNF286BP0CG31 522 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
APTX-233ENST00000496030 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
APTX-233ENST00000496030 RILPL1Q5EBL4 403 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 LRCH2Q5VUJ6 765 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
APTX-233ENST00000496030 TRIM50Q86XT4 487 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
APTX-233ENST00000496030 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
APTX-233ENST00000496030 PRRC2BQ5JSZ5 2229 aaKnown RBP13.42□□□□□ -0.26
APTX-233ENST00000496030 EML1O00423 815 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 GAS7O60861 476 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 TIMP1P01033 207 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
APTX-233ENST00000496030 KRT76Q01546 638 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 PTGDRQ13258 359 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 PPP2R5CQ13362 524 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 IL17AQ16552 155 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 CALCRLQ16602 461 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 ANKRD33Q7Z3H0 272 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 TEKT3Q9BXF9 490 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 NKX2-4Q9H2Z4 354 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 C11orf16Q9NQ32 467 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 STARD7Q9NQZ5 370 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 TBX21Q9UL17 535 aa13.42□□□□□ -0.26
APTX-233ENST00000496030 H3BRB1 525 aa13.41□□□□□ -0.26
APTX-233ENST00000496030 ARVCFO00192 962 aa13.41□□□□□ -0.26
APTX-233ENST00000496030 BRD1O95696 1058 aa13.41□□□□□ -0.26
APTX-233ENST00000496030 SUPT20HL2P0C7V6 817 aa13.41□□□□□ -0.26
APTX-233ENST00000496030 ACRP10323 421 aa13.41□□□□□ -0.26
APTX-233ENST00000496030 PDIA4P13667 645 aaKnown RBP13.41□□□□□ -0.26
APTX-233ENST00000496030 ATP4AP20648 1035 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms