RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 POTEMA6NI47 508 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC9-226ENST00000496026 STK38Q15208 465 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 EPHA7Q15375 998 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 ARL6IP4Q66PJ3 421 aaKnown RBP16.58■□□□□ 0.24
HDAC9-226ENST00000496026 ATL3Q6DD88 541 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 C7orf31Q8N865 590 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 CFAP45Q9UL16 551 aa16.58■□□□□ 0.24
HDAC9-226ENST00000496026 VWA3AA6NCI4 1184 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 ARVCFO00192 962 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 HAS3O00219 553 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 SLC26A2P50443 739 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 NFRKBQ6P4R8 1299 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 BANK1Q8NDB2 785 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 SEZ6LQ9BYH1 1024 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 RNPEPQ9H4A4 650 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 TRPC6Q9Y210 931 aa16.57■□□□□ 0.24
HDAC9-226ENST00000496026 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
HDAC9-226ENST00000496026 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 DKC1O60832 514 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDAC9-226ENST00000496026 YEATS4O95619 227 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 MARCKSP29966 332 aaPredicted RBP16.56■□□□□ 0.24
HDAC9-226ENST00000496026 PSMC5P62195 406 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 CYP4A11Q02928 519 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 PDIA5Q14554 519 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 PTPAQ15257 358 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 IL17AQ16552 155 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 LRRC26Q2I0M4 334 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 TRMT1LQ7Z2T5 733 aaKnown RBP16.56■□□□□ 0.24
HDAC9-226ENST00000496026 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 TNPO1Q92973 898 aaKnown RBP16.56■□□□□ 0.24
HDAC9-226ENST00000496026 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 ATP11BQ9Y2G3 1177 aa16.56■□□□□ 0.24
HDAC9-226ENST00000496026 MROH7Q68CQ1 1323 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 POTEB3A0JP26 581 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 PQBP1O60828 265 aaKnown RBP16.55■□□□□ 0.24
HDAC9-226ENST00000496026 SMIM10L2AP0DMW4 78 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 SMIM10L2BP0DMW5 78 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 QARSP47897 775 aaKnown RBP16.55■□□□□ 0.24
HDAC9-226ENST00000496026 RTP1P59025 263 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 KRT85P78386 507 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 PTPN11Q06124 597 aaPredicted RBP16.55■□□□□ 0.24
HDAC9-226ENST00000496026 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 UGCGQ16739 394 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 TRIM60Q495X7 471 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 POTEBQ6S5H4 581 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 SLC43A3Q8NBI5 491 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 FAM167AQ96KS9 214 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 RGL1Q9NZL6 768 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 HDAC6Q9UBN7 1215 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 STK24Q9Y6E0 443 aa16.55■□□□□ 0.24
HDAC9-226ENST00000496026 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
HDAC9-226ENST00000496026 SPTLC2O15270 562 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 TLR3O15455 904 aaKnown RBP16.54■□□□□ 0.24
HDAC9-226ENST00000496026 OATP04181 439 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 CDK7P50613 346 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 PRKCEQ02156 737 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 PPFIA1Q13136 1202 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 CTTNQ14247 550 aaKnown RBP16.54■□□□□ 0.24
HDAC9-226ENST00000496026 SNX17Q15036 470 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 KRT79Q5XKE5 535 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 SESTD1Q86VW0 696 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 ATP8B4Q8TF62 1192 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 LXNQ9BS40 222 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 ZSWIM4Q9H7M6 989 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 NRBP2Q9NSY0 501 aa16.54■□□□□ 0.24
HDAC9-226ENST00000496026 SRPRBQ9Y5M8 271 aaKnown RBP16.54■□□□□ 0.24
HDAC9-226ENST00000496026 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 PP2D1A8MPX8 630 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 DCDC2CA8MYV0 355 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 ZNF862O60290 1169 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 HBP1O60381 514 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 GNAT1P11488 350 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 ATP4AP20648 1035 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 LONP1P36776 959 aaKnown RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 CCT6AP40227 531 aaKnown RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 KCNG4Q8TDN1 519 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms