RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
TBRG4-217ENST00000495973 PNMA6AP0CW24 399 aaPredicted RBP12.3□□□□□ -0.44
TBRG4-217ENST00000495973 CASP4P49662 377 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 MTMR2Q13614 643 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
TBRG4-217ENST00000495973 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 MOCS3O95396 460 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 RPA1P27694 616 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 CYP2J2P51589 502 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 COG2Q14746 738 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 ZKSCAN4Q969J2 545 aaPredicted RBP12.3□□□□□ -0.44
TBRG4-217ENST00000495973 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 ZNF263O14978 683 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 CETN3O15182 167 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 PPP1R2P41236 205 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 KIF11P52732 1056 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 KRT83P78385 493 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 KIF5AQ12840 1032 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 TTYH3Q9C0H2 523 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 TCEAL9Q9UHQ7 104 aa12.3□□□□□ -0.44
TBRG4-217ENST00000495973 KRT86O43790 486 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 RNASE9P60153 205 aaKnown RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 SPP2Q13103 211 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 PSMD2Q13200 908 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 NBPF12Q5TAG4 269 aaPredicted RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 NOA1Q8NC60 698 aaKnown RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 CCDC43Q96MW1 224 aaKnown RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 PSMD1Q99460 953 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 SUGCTQ9HAC7 445 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 MYO6Q9UM54 1294 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 SIK3Q9Y2K2 1263 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 MRPL11Q9Y3B7 192 aaKnown RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 NCK2O43639 380 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 ASNSP08243 561 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 CAPN2P17655 700 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 GMPSP49915 693 aaPredicted RBP12.29□□□□□ -0.44
TBRG4-217ENST00000495973 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 ERGIC2Q96RQ1 377 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 COL20A1Q9P218 1284 aa12.29□□□□□ -0.44
TBRG4-217ENST00000495973 CYP3A7-CYP3A51PA0A087WV96 503 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 SLC9A1P19634 815 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CYP3A7P24462 503 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
TBRG4-217ENST00000495973 Q4G0T1 1027 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 MUM1L1Q5H9M0 696 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 GJB7Q6PEY0 223 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 IGLV3-22A0A075B6J6 115 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
TBRG4-217ENST00000495973 IPO5O00410 1097 aaKnown RBP12.28□□□□□ -0.44
TBRG4-217ENST00000495973 PEX10O60683 326 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 SLITRK3O94933 977 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
TBRG4-217ENST00000495973 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 MAGEA1P43355 309 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 EHHADHQ08426 723 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 RINT1Q6NUQ1 792 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 SPAG5Q96R06 1193 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 LXNQ9BS40 222 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 ARMCX3Q9UH62 379 aaPredicted RBP12.28□□□□□ -0.44
TBRG4-217ENST00000495973 CAPN6Q9Y6Q1 641 aa12.28□□□□□ -0.44
TBRG4-217ENST00000495973 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.44
TBRG4-217ENST00000495973 TERF2Q15554 542 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 ODR4Q5SWX8 454 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 SYCP3Q8IZU3 236 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.44
TBRG4-217ENST00000495973 HACL1Q9UJ83 578 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 PCDHA2Q9Y5H9 948 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 PCDHA13Q9Y5I0 950 aa12.27□□□□□ -0.44
TBRG4-217ENST00000495973 TISP43B9A030 160 aa12.27□□□□□ -0.45
TBRG4-217ENST00000495973 AKAP3O75969 853 aa12.27□□□□□ -0.45
TBRG4-217ENST00000495973 H2AFXP16104 143 aaPredicted RBP12.27□□□□□ -0.45
TBRG4-217ENST00000495973 KNOP1Q1ED39 458 aaKnown RBP12.27□□□□□ -0.45
TBRG4-217ENST00000495973 PNKPQ96T60 521 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms