RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PTPRSQ13332 1948 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 TRANK1O15050 2925 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 FAM86B1E9PN63 330 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 DEXIO95424 95 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 CA3P07451 260 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 FAM86B2P0C5J1 330 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 CIITAP33076 1130 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 STAT5BP51692 787 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 GRIK4Q16099 956 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 DBF4BQ8NFT6 615 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 APBB2Q92870 758 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 C22orf23Q9BZE7 217 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 TBC1D22BQ9NU19 505 aa27.56■■■□□ 2
HLA-C-209ENST00000495835 IGKV6D-21A0A0A0MT36 114 aa27.55■■■□□ 2
HLA-C-209ENST00000495835 TLL1O43897 1013 aa27.55■■■□□ 2
HLA-C-209ENST00000495835 SEPT8Q92599 483 aa27.55■■■□□ 2
HLA-C-209ENST00000495835 TUBE1Q9UJT0 475 aa27.55■■■□□ 2
HLA-C-209ENST00000495835 IPO5O00410 1097 aaKnown RBP27.54■■■□□ 2
HLA-C-209ENST00000495835 GJB5O95377 273 aa27.54■■■□□ 2
HLA-C-209ENST00000495835 MARK3P27448 753 aa27.54■■■□□ 2
HLA-C-209ENST00000495835 MKRN4PQ13434 485 aaPredicted RBP27.54■■■□□ 2
HLA-C-209ENST00000495835 RAD9AQ99638 391 aa27.54■■■□□ 2
HLA-C-209ENST00000495835 ZBED2Q9BTP6 218 aa27.54■■■□□ 2
HLA-C-209ENST00000495835 MICAL3Q7RTP6 2002 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 DHX15O43143 795 aaKnown RBP27.53■■■□□ 2
HLA-C-209ENST00000495835 INSRRP14616 1297 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 USP11P51784 963 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 TCTN1Q2MV58 587 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 MARCH8Q5T0T0 291 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 GALNT17Q6IS24 598 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 ABHD15Q6UXT9 468 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 IL17RAQ96F46 866 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 VPS54Q9P1Q0 977 aa27.53■■■□□ 2
HLA-C-209ENST00000495835 AMHP03971 560 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 POU3F3P20264 500 aaPredicted RBP27.52■■■□□ 2
HLA-C-209ENST00000495835 NLRP5P59047 1200 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 DEFB103AP81534 67 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 TAP1Q03518 808 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 ANKRD1Q15327 319 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 FAM160B1Q5W0V3 765 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 ZNF577Q9BSK1 485 aa27.52■■■□□ 2
HLA-C-209ENST00000495835 ADAMTS3O15072 1205 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 CDKL5O76039 1030 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 CTSHP09668 335 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 ADGRE1Q14246 886 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 PLCB4Q15147 1175 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 ZNF746Q6NUN9 644 aaPredicted RBP27.51■■□□□ 1.99
HLA-C-209ENST00000495835 MIS18BP1Q6P0N0 1132 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 SMAP1Q8IYB5 467 aaPredicted RBP27.51■■□□□ 1.99
HLA-C-209ENST00000495835 PCDHA4Q9UN74 947 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 TRPC6Q9Y210 931 aa27.51■■□□□ 1.99
HLA-C-209ENST00000495835 POTEB3A0JP26 581 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 CCNE2O96020 404 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 POTEBQ6S5H4 581 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 RUFY4Q6ZNE9 571 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 FAM43BQ6ZT52 329 aaPredicted RBP27.5■■□□□ 1.99
HLA-C-209ENST00000495835 TCEAL9Q9UHQ7 104 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 INSL6Q9Y581 213 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 SQORQ9Y6N5 450 aa27.5■■□□□ 1.99
HLA-C-209ENST00000495835 CHRNA1P02708 482 aa27.49■■□□□ 1.99
HLA-C-209ENST00000495835 KRT76Q01546 638 aa27.49■■□□□ 1.99
HLA-C-209ENST00000495835 MGAT3Q09327 533 aa27.49■■□□□ 1.99
HLA-C-209ENST00000495835 DAGLBQ8NCG7 672 aa27.49■■□□□ 1.99
HLA-C-209ENST00000495835 PCDHA2Q9Y5H9 948 aa27.49■■□□□ 1.99
HLA-C-209ENST00000495835 DLL1O00548 723 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 HBP1O60381 514 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 PPFIA3O75145 1194 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 IGFBP4P22692 258 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 STK3Q13188 491 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 PRR16Q569H4 304 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 IER5Q5VY09 327 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 NME8Q8N427 588 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 RASGRP4Q8TDF6 673 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 DNAJB3Q8WWF6 145 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 IFIH1Q9BYX4 1025 aaKnown RBP27.48■■□□□ 1.99
HLA-C-209ENST00000495835 SLKQ9H2G2 1235 aaPredicted RBP27.48■■□□□ 1.99
HLA-C-209ENST00000495835 ZNF302Q9NR11 478 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 COL1A2P08123 1366 aa27.48■■□□□ 1.99
HLA-C-209ENST00000495835 SMIM35A0A1B0GVV1 85 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 BACH1O14867 736 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 PFKFB2O60825 505 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 IGBP1P78318 339 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.47■■□□□ 1.995e-7■■■■□ 21.8
HLA-C-209ENST00000495835 BLIDQ8IZY5 108 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 USP38Q8NB14 1042 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 ATP8B4Q8TF62 1192 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 TOP1MTQ969P6 601 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 LENG9Q96B70 501 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 LARP6Q9BRS8 491 aaKnown RBP27.47■■□□□ 1.99
HLA-C-209ENST00000495835 PCDHA10Q9Y5I2 948 aa27.47■■□□□ 1.99
HLA-C-209ENST00000495835 MYH9P35579 1960 aaKnown RBP27.46■■□□□ 1.99
HLA-C-209ENST00000495835 DDX39AO00148 427 aaKnown RBP27.46■■□□□ 1.99
HLA-C-209ENST00000495835 HTRA4P83105 476 aaPredicted RBP27.46■■□□□ 1.99
HLA-C-209ENST00000495835 ZNF484Q5JVG2 852 aa27.46■■□□□ 1.99
HLA-C-209ENST00000495835 RIT2Q99578 217 aa27.46■■□□□ 1.99
HLA-C-209ENST00000495835 MAFBQ9Y5Q3 323 aaPredicted RBP27.46■■□□□ 1.99
HLA-C-209ENST00000495835 STK36Q9NRP7 1315 aa27.45■■□□□ 1.99
HLA-C-209ENST00000495835 M0R2N6 131 aa27.45■■□□□ 1.98
HLA-C-209ENST00000495835 GTPBP6O43824 516 aaPredicted RBP27.45■■□□□ 1.98
HLA-C-209ENST00000495835 PSAPP07602 524 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms