RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 GHRP10912 638 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 RCAN1P53805 252 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 AP3B2Q13367 1082 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 CEP55Q53EZ4 464 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 DNAJB3Q8WWF6 145 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 SAMD11Q96NU1 681 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 NFASCO94856 1347 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 MUC3AQ02505 3323 aa21.03■□□□□ 0.96
CLCNKA-207ENST00000495784 MBLAC1A4D2B0 266 aaPredicted RBP21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 RRN3P2A6NIE6 340 aa21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 RPLP2P05387 115 aaKnown RBP21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 CDC27P30260 824 aa21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 ZNF76P36508 570 aa21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 TRPC6Q9Y210 931 aa21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 XIRP2A4UGR9 3374 aa21.02■□□□□ 0.96
CLCNKA-207ENST00000495784 KAT6AQ92794 2004 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 CCDC196A0A1B0GTZ2 297 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 ARP10275 920 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 INSRRP14616 1297 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 SREBF1P36956 1147 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 METAP2P50579 478 aaKnown RBP eCLIP21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 ACTR2P61160 394 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 MGAT3Q09327 533 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 LPIN1Q14693 890 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 EPC2Q52LR7 807 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 MARCH8Q5T0T0 291 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 PCYT2Q99447 389 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 FAM49AQ9H0Q0 323 aaPredicted RBP21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 AGO4Q9HCK5 861 aaKnown RBP21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 TMEM260Q9NX78 707 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 SIP14410 1827 aa21.01■□□□□ 0.95
CLCNKA-207ENST00000495784 CPA1P15085 419 aa21■□□□□ 0.95
CLCNKA-207ENST00000495784 PTPROQ16827 1216 aa21■□□□□ 0.95
CLCNKA-207ENST00000495784 JAKMIP1Q96N16 626 aaKnown RBP21■□□□□ 0.95
CLCNKA-207ENST00000495784 CDY2AQ9Y6F7 541 aa21■□□□□ 0.95
CLCNKA-207ENST00000495784 NCOR1O75376 2440 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 MEIS1O00470 390 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 ADD1P35611 737 aaKnown RBP20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 STAT5BP51692 787 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 MRPS6P82932 125 aaKnown RBP20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 APOBRQ0VD83 1088 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 ITGB3BPQ13352 177 aaPredicted RBP20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 PFKFB3Q16875 520 aaPredicted RBP20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 FBXO47Q5MNV8 452 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 IER5Q5VY09 327 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 Q6ZUG5 572 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 PLPPR4Q7Z2D5 763 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 ZBTB10Q96DT7 871 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 IL17RAQ96F46 866 aa20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 TCF20Q9UGU0 1960 aaKnown RBP20.99■□□□□ 0.95
CLCNKA-207ENST00000495784 M0QZ92 97 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 SCG2P13521 617 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 CLK2P49760 499 aaKnown RBP20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 PLCB4Q15147 1175 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 JAKMIP3Q5VZ66 844 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 BLOC1S2Q6QNY1 142 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 TSHZ1Q6ZSZ6 1077 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 NIPA1Q7RTP0 329 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 TMEM192Q8IY95 271 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 FIBCD1Q8N539 461 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 BRF1Q92994 677 aa20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 MRPL38Q96DV4 380 aaKnown RBP20.98■□□□□ 0.95
CLCNKA-207ENST00000495784 POTEB3A0JP26 581 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 HSPA4P34932 840 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 SLC26A2P50443 739 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 GPM6BQ13491 265 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 POTEBQ6S5H4 581 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 CCDC12Q8WUD4 166 aaPredicted RBP20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 TRAPPC12Q8WVT3 735 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 KCNB2Q92953 911 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 UBE2ZQ9H832 354 aaPredicted RBP20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 PCDHA2Q9Y5H9 948 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 SNX14Q9Y5W7 946 aa20.97■□□□□ 0.95
CLCNKA-207ENST00000495784 COL4A6Q14031 1691 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 H3BNC9 293 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 ENPP3O14638 875 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 BACH1O14867 736 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 AKAP17AQ02040 695 aaKnown RBP20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 TIGD5Q53EQ6 642 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 FAM160B1Q5W0V3 765 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 MCTP2Q6DN12 878 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 C6orf50Q9HD87 102 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 TRPV2Q9Y5S1 764 aa20.96■□□□□ 0.95
CLCNKA-207ENST00000495784 BDP1A6H8Y1 2624 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 ESYT2A0FGR8 921 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 FAM86B1E9PN63 330 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 ATG7O95352 703 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 CCNE2O96020 404 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 FAM86B2P0C5J1 330 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 CD52P31358 61 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 CTNNB1P35222 781 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 TMEM62Q0P6H9 643 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 REXO1Q8N1G1 1221 aaKnown RBP20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 ZMYND12Q9H0C1 365 aa20.95■□□□□ 0.94
CLCNKA-207ENST00000495784 AGO3Q9H9G7 860 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms