RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 CHRNA1P02708 482 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 CTSHP09668 335 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 POU3F3P20264 500 aaPredicted RBP8.22□□□□□ -1.09
VPS52-221ENST00000495755 MARK3P27448 753 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 GNA11P29992 359 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 ZNF76P36508 570 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 AKAP17AQ02040 695 aaKnown RBP8.22□□□□□ -1.09
VPS52-221ENST00000495755 PPFIA1Q13136 1202 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 GRIK4Q16099 956 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 TAF2Q6P1X5 1199 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 ABHD15Q6UXT9 468 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS52-221ENST00000495755 REXO1Q8N1G1 1221 aaKnown RBP8.22□□□□□ -1.09
VPS52-221ENST00000495755 SEPT8Q92599 483 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 ZNF274Q96GC6 653 aaPredicted RBP8.22□□□□□ -1.09
VPS52-221ENST00000495755 RAD9AQ99638 391 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 SLC26A6Q9BXS9 759 aa8.22□□□□□ -1.09
VPS52-221ENST00000495755 UPF3BQ9BZI7 483 aaKnown RBP8.22□□□□□ -1.09
VPS52-221ENST00000495755 EPOPA6NHQ4 379 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 RRN3P2A6NIE6 340 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 RFXAPO00287 272 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 EDIL3O43854 480 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 INSRRP14616 1297 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 IGFBP4P22692 258 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 CIITAP33076 1130 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 STAT5BP51692 787 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 MGAT3Q09327 533 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 PLCB4Q15147 1175 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 PLA2G4DQ86XP0 818 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 BICD2Q8TD16 824 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 ARNTL2Q8WYA1 636 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 ZBTB10Q96DT7 871 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 LARP6Q9BRS8 491 aaKnown RBP8.21□□□□□ -1.1
VPS52-221ENST00000495755 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
VPS52-221ENST00000495755 AZI2Q9H6S1 392 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 CERS4Q9HA82 394 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 SH3GLB2Q9NR46 395 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 PDRG1Q9NUG6 133 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 VPS54Q9P1Q0 977 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 TUBE1Q9UJT0 475 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 MUC3AQ02505 3323 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 PTPRSQ13332 1948 aa8.21□□□□□ -1.1
VPS52-221ENST00000495755 MYO9BQ13459 2157 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 M0R2N6 131 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 IPO5O00410 1097 aaKnown RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 AMHP03971 560 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 SLC26A2P50443 739 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 USP11P51784 963 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 ERVK-21P61565 698 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 HTRA4P83105 476 aaPredicted RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 SSRP1Q08945 709 aaKnown RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 LPIN1Q14693 890 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 RSPH3Q86UC2 560 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 CCDC148Q8NFR7 591 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 DNAJB3Q8WWF6 145 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 PPM1EQ8WY54 764 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 APBB2Q92870 758 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 TNPO1Q92973 898 aaKnown RBP8.2□□□□□ -1.1
VPS52-221ENST00000495755 TOP1MTQ969P6 601 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 LENG9Q96B70 501 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 ZNF577Q9BSK1 485 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 PRDM6Q9NQX0 595 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 TBC1D22BQ9NU19 505 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 INSL6Q9Y581 213 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 BDP1A6H8Y1 2624 aa8.2□□□□□ -1.1
VPS52-221ENST00000495755 TTC28Q96AY4 2481 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 LINC01553A4QN01 128 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 CPLX1O14810 134 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 LPXNO60711 386 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 DEXIO95424 95 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 RPLP2P05387 115 aaKnown RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 GHRP10912 638 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 ATP4AP20648 1035 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 NLRP5P59047 1200 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 ANAPC15P60006 121 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 IGBP1P78318 339 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 MRPS6P82932 125 aaKnown RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 STK3Q13188 491 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 GRB10Q13322 594 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 NPY5RQ15761 445 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 PRR16Q569H4 304 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 FBXO47Q5MNV8 452 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 FAM160B1Q5W0V3 765 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 ZNF746Q6NUN9 644 aaPredicted RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 MIS18BP1Q6P0N0 1132 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms