RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ZNF112Q9UJU3 913 aa10.22□□□□□ -0.77
RPSA-209ENST00000495394 DUSP12Q9UNI6 340 aa10.22□□□□□ -0.77
RPSA-209ENST00000495394 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
RPSA-209ENST00000495394 SPATA31A1Q5TZJ5 1347 aa10.22□□□□□ -0.77
RPSA-209ENST00000495394 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
RPSA-209ENST00000495394 TRAV6A0A075B6T7 132 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 YKT6O15498 198 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 USP2O75604 605 aaPredicted RBP10.21□□□□□ -0.77
RPSA-209ENST00000495394 TRPA1O75762 1119 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 BAG6P46379 1132 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 ARID5AQ03989 594 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 HLTFQ14527 1009 aaKnown RBP eCLIP10.21□□□□□ -0.77
RPSA-209ENST00000495394 SSPNQ14714 243 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 CCDC57Q2TAC2 916 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 SETMARQ53H47 684 aaPredicted RBP10.21□□□□□ -0.77
RPSA-209ENST00000495394 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 PPP1R21Q6ZMI0 780 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 NLRP9Q7RTR0 991 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 DEFB132Q7Z7B7 95 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 ZNF540Q8NDQ6 660 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 IPMKQ8NFU5 416 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 OR52K2Q8NGK3 314 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 SPDL1Q96EA4 605 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 LTV1Q96GA3 475 aaPredicted RBP10.21□□□□□ -0.77
RPSA-209ENST00000495394 CNDP2Q96KP4 475 aaKnown RBP10.21□□□□□ -0.77
RPSA-209ENST00000495394 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 RTFDC1Q9BY42 306 aaPredicted RBP10.21□□□□□ -0.77
RPSA-209ENST00000495394 B3GNT4Q9C0J1 378 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 TBC1D22BQ9NU19 505 aa10.21□□□□□ -0.77
RPSA-209ENST00000495394 GOLGA6L7A0A1B0GV03 622 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 RASSF10A6NK89 507 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 ZW10O43264 779 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 GFPT2O94808 682 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 DDHD2O94830 711 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 CSTF2P33240 577 aaKnown RBP eCLIP10.21□□□□□ -0.781e-6■■■□□ 19.2
RPSA-209ENST00000495394 RENBPP51606 427 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 RARSP54136 660 aaKnown RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 MTX1Q13505 466 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 SKOR2Q2VWA4 1001 aaPredicted RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 IFFO2Q5TF58 517 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 ENAHQ8N8S7 591 aaPredicted RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 GOLM1Q8NBJ4 401 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 CGREF1Q99674 301 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 NTPCRQ9BSD7 190 aaKnown RBP10.21□□□□□ -0.78
RPSA-209ENST00000495394 SATB2Q9UPW6 733 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.78
RPSA-209ENST00000495394 NCAPD2Q15021 1401 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 ZNF3P17036 446 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 SERPINB3P29508 390 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 CHKAP35790 457 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 ST13P50502 369 aaKnown RBP10.2□□□□□ -0.78
RPSA-209ENST00000495394 TUBA4AP68366 448 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 FANCCQ00597 558 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 AP1B1Q10567 949 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
RPSA-209ENST00000495394 NFE2L1Q14494 772 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 KCNB1Q14721 858 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 CCNG2Q16589 344 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 FAM180BQ6P0A1 224 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 CCDC121Q6ZUS5 278 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 MCF2L2Q86YR7 1114 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 FAM20CQ8IXL6 584 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 C7orf61Q8IZ16 206 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 GOT1L1Q8NHS2 421 aaPredicted RBP10.2□□□□□ -0.78
RPSA-209ENST00000495394 PPP1R14CQ8TAE6 165 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 ZWILCHQ9H900 591 aa10.2□□□□□ -0.78
RPSA-209ENST00000495394 NCOA5Q9HCD5 579 aaKnown RBP10.2□□□□□ -0.78
RPSA-209ENST00000495394 CETN3O15182 167 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 GPR37O15354 613 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 NVLO15381 856 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 FBXO21O94952 628 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 ACTN2P35609 894 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 HNF1BP35680 557 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 CCT6AP40227 531 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 CTCFP49711 727 aaPredicted RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 SMAD4Q13485 552 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 ITGA7Q13683 1181 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 ANKDD1AQ495B1 522 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 THEMIS2Q5TEJ8 643 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 GAS2L3Q86XJ1 694 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 SMC1BQ8NDV3 1235 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 INTS12Q96CB8 462 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 SPTLC3Q9NUV7 552 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 FANCLQ9NW38 375 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 GIMAP2Q9UG22 337 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 MTRF1LQ9UGC7 380 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 AGTPBP1Q9UPW5 1226 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms