RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 ZNF561-AS1K7EIQ3 104 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 TRAF5O00463 557 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 SLURP1P55000 103 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 PRR5P85299 388 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 AMPD3Q01432 767 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 SEPT7Q16181 437 aaKnown RBP3.85□□□□□ -1.79
LRIF1-203ENST00000494675 ARHGAP44Q17R89 818 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 PTRH1Q86Y79 214 aaKnown RBP3.85□□□□□ -1.79
LRIF1-203ENST00000494675 NLGN4XQ8N0W4 816 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 NXPE1Q8N323 547 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 ATL2Q8NHH9 583 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 USP7Q93009 1102 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 PUS7Q96PZ0 661 aaKnown RBP3.85□□□□□ -1.79
LRIF1-203ENST00000494675 ORAI3Q9BRQ5 295 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 BRINP2Q9C0B6 783 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 SMOC1Q9H4F8 434 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 FAN1Q9Y2M0 1017 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 ATP8A1Q9Y2Q0 1164 aa3.85□□□□□ -1.79
LRIF1-203ENST00000494675 TCRBV5S4A2TA0A5A2 114 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 SLC12A8A0AV02 714 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 PTPDC1A2A3K4 754 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 KCNK3O14649 394 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 SLC27A2O14975 620 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 SGSM2O43147 1006 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 KRT37O76014 449 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 ZBTB7AO95365 584 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 F2P00734 622 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 AMY2AP04746 511 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 AMY2BP19961 511 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 ZNF200P98182 395 aaPredicted RBP3.84□□□□□ -1.79
LRIF1-203ENST00000494675 DHCR24Q15392 516 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 EMC4Q5J8M3 183 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 HABP4Q5JVS0 413 aaKnown RBP3.84□□□□□ -1.79
LRIF1-203ENST00000494675 UBXN11Q5T124 520 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 TRIM48Q8IWZ4 208 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 RBM12BQ8IXT5 1001 aaKnown RBP3.84□□□□□ -1.79
LRIF1-203ENST00000494675 TP53I13Q8NBR0 393 aaPredicted RBP3.84□□□□□ -1.79
LRIF1-203ENST00000494675 ALG3Q92685 438 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 TTC1Q99614 292 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 GPR20Q99678 358 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 CD244Q9BZW8 370 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 SMURF1Q9HCE7 757 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 MYOTQ9UBF9 498 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 B4GALT6Q9UBX8 382 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 MCM8Q9UJA3 840 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 PCDHB4Q9Y5E5 795 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 PMF1-BGLAPU3KQ54 211 aa3.84□□□□□ -1.79
LRIF1-203ENST00000494675 ZNF891A8MT65 544 aaPredicted RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 TADA3O75528 432 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 NCAM1P13591 858 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 INSRRP14616 1297 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 LIMS1P48059 325 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 MECP2P51608 486 aaKnown RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 IL2P60568 153 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 FOXO4P98177 505 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 SLC9A5Q14940 896 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 CYP4F22Q6NT55 531 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 KCTD1Q719H9 257 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 STRA8Q7Z7C7 330 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 AFAP1L2Q8N4X5 818 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 UHMK1Q8TAS1 419 aaKnown RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 PHOSPHO1Q8TCT1 267 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 TSPAN17Q96FV3 270 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 YIPF4Q9BSR8 244 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 BDH2Q9BUT1 245 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 BOCQ9BWV1 1114 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 FAM126AQ9BYI3 521 aaPredicted RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 SRPK3Q9UPE1 567 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 ZNF652Q9Y2D9 606 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 ATP23Q9Y6H3 246 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 MAN2B1O00754 1011 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 SCDO00767 359 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 BRINP1O60477 761 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 HIP1RO75146 1068 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 IRF9Q00978 393 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 TUSC3Q13454 348 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 PUM1Q14671 1186 aaKnown RBP eCLIP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 FIGNQ5HY92 759 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 ZFYVE27Q5T4F4 411 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 HHIPL2Q6UWX4 724 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 C11orf74Q86VG3 221 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 DDX42Q86XP3 938 aaKnown RBP eCLIP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 SH3RF2Q8TEC5 729 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 GPR101Q96P66 508 aaPredicted RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 RNF38Q9H0F5 515 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 ADAM7Q9H2U9 754 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 IFT22Q9H7X7 185 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 THG1LQ9NWX6 298 aaKnown RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 CNOT11Q9UKZ1 510 aaKnown RBP3.83□□□□□ -1.8
LRIF1-203ENST00000494675 HCFC2Q9Y5Z7 792 aa3.83□□□□□ -1.8
LRIF1-203ENST00000494675 TCRBV5S2A0A599 114 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 H7C1D1 291 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 K7ESM1 405 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 FFAR3O14843 346 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 ZEB2O60315 1214 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 LTFP02788 710 aa3.82□□□□□ -1.8
LRIF1-203ENST00000494675 ATP2A2P16615 1042 aaKnown RBP3.82□□□□□ -1.8
LRIF1-203ENST00000494675 CDK11BP21127 795 aaKnown RBP3.82□□□□□ -1.8
LRIF1-203ENST00000494675 IGFBP6P24592 240 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms