RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HSPBP1Q9NZL4 362 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 SFMBT1Q9UHJ3 866 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 COA3Q9Y2R0 106 aaPredicted RBP6.36□□□□□ -1.39
SMC4-224ENST00000494612 PCDHA8Q9Y5H6 950 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 CYP1A1P04798 512 aaPredicted RBP6.35□□□□□ -1.39
SMC4-224ENST00000494612 PPP2CBP62714 309 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 PPP2CAP67775 309 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 GABREP78334 506 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 CHRNA2Q15822 529 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 STEAP3Q658P3 488 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 BRAPQ7Z569 592 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 PLEKHH3Q7Z736 793 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 IGDCC4Q8TDY8 1250 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMC4-224ENST00000494612 DCAF4Q8WV16 495 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
SMC4-224ENST00000494612 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 L2HGDHQ9H9P8 463 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 PCDHA2Q9Y5H9 948 aa6.35□□□□□ -1.39
SMC4-224ENST00000494612 NPEPPSL1A6NEC2 478 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 RASGRP1O95267 797 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 MYCLP1P12525 358 aaPredicted RBP6.34□□□□□ -1.39
SMC4-224ENST00000494612 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
SMC4-224ENST00000494612 GUCY1A3Q02108 690 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 KLF10Q13118 480 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 NIM1KQ8IY84 436 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 UBR7Q8N806 425 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 SCLYQ96I15 445 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 ZSWIM3Q96MP5 696 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 WWC2-AS2Q96NR7 200 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
SMC4-224ENST00000494612 PPARGC1AQ9UBK2 798 aaKnown RBP6.34□□□□□ -1.39
SMC4-224ENST00000494612 PCDHB4Q9Y5E5 795 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 NPFFR2Q9Y5X5 522 aa6.34□□□□□ -1.39
SMC4-224ENST00000494612 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.33□□□□□ -1.4
SMC4-224ENST00000494612 CYP7B1O75881 506 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 CRTAMO95727 393 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 SRGAP2CP0DJJ0 459 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 MASP1P48740 699 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 FNDC3BQ53EP0 1204 aaKnown RBP6.33□□□□□ -1.4
SMC4-224ENST00000494612 MTDHQ86UE4 582 aaKnown RBP6.33□□□□□ -1.4
SMC4-224ENST00000494612 KBTBD2Q8IY47 623 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 SYNPOQ8N3V7 929 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 NINJ1Q92982 152 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
SMC4-224ENST00000494612 TMEM209Q96SK2 561 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 DEF6Q9H4E7 631 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 TRIM39Q9HCM9 518 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 IFT57Q9NWB7 429 aa6.33□□□□□ -1.4
SMC4-224ENST00000494612 OPA1O60313 960 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 DNAJC8O75937 253 aaPredicted RBP6.32□□□□□ -1.4
SMC4-224ENST00000494612 COL6A1P12109 1028 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 TGFB2P61812 414 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 ZNF460Q14592 562 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 RNF187Q5TA31 235 aaPredicted RBP6.32□□□□□ -1.4
SMC4-224ENST00000494612 STYK1Q6J9G0 422 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 CIR1Q86X95 450 aaPredicted RBP6.32□□□□□ -1.4
SMC4-224ENST00000494612 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 PALM2Q8IXS6 379 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 KLHL36Q8N4N3 616 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 PTPN18Q99952 460 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 CLDND1Q9NY35 253 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 CROTQ9UKG9 612 aa6.32□□□□□ -1.4
SMC4-224ENST00000494612 TNPO3Q9Y5L0 923 aaKnown RBP6.32□□□□□ -1.4
SMC4-224ENST00000494612 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 DNAJC6O75061 913 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 DGKIO75912 1065 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 NFATC3Q12968 1075 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 R3HDM1Q15032 1099 aaKnown RBP6.31□□□□□ -1.4
SMC4-224ENST00000494612 TAF7LQ5H9L4 462 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 ZNF585AQ6P3V2 769 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 PHOSPHO1Q8TCT1 267 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 MFSD3Q96ES6 412 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 GPR27Q9NS67 375 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 C11orf21Q9P2W6 132 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 MYOTQ9UBF9 498 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
SMC4-224ENST00000494612 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
SMC4-224ENST00000494612 AQP7O14520 342 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 B4GALT4O60513 344 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 EFCAB14O75071 495 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 RFPL3O75679 317 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 CNGA1P29973 690 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 NEK4P51957 841 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 GPR85P60893 370 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 TRIM61Q5EBN2 209 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 CYP4F22Q6NT55 531 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 MAMDC2Q7Z304 686 aaPredicted RBP6.3□□□□□ -1.4
SMC4-224ENST00000494612 ZC3H7AQ8IWR0 971 aaKnown RBP6.3□□□□□ -1.4
SMC4-224ENST00000494612 GSTCDQ8NEC7 633 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 WRNIP1Q96S55 665 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms