RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 RPAINQ86UA6 219 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 DAGLBQ8NCG7 672 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 TPCN1Q9ULQ1 816 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 PCDHA4Q9UN74 947 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 YBX2Q9Y2T7 364 aaKnown RBP14.98□□□□□ -0.01
ERCC3-209ENST00000494464 EYSQ5T1H1 3165 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 IGKV6D-21A0A0A0MT36 114 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 ABHD14A-ACY1A0A1B0GW23 586 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 RSPH10B2B2RC85 870 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 IPO5O00410 1097 aaKnown RBP14.98□□□□□ -0.01
ERCC3-209ENST00000494464 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
ERCC3-209ENST00000494464 RSPH10BP0C881 870 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 MARK3P27448 753 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 SLC26A2P50443 739 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 AK2P54819 239 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 NLRP5P59047 1200 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 WDR5P61964 334 aaKnown RBP14.98□□□□□ -0.01
ERCC3-209ENST00000494464 GRIN2CQ14957 1233 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 GRIK4Q16099 956 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 GALNT17Q6IS24 598 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 TAF2Q6P1X5 1199 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 PLPPR4Q7Z2D5 763 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 MYLIPQ8WY64 445 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 LENG9Q96B70 501 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 SLKQ9H2G2 1235 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-209ENST00000494464 AZI2Q9H6S1 392 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 TUBE1Q9UJT0 475 aa14.98□□□□□ -0.01
ERCC3-209ENST00000494464 MBLAC1A4D2B0 266 aaPredicted RBP14.97□□□□□ -0.01
ERCC3-209ENST00000494464 DHX15O43143 795 aaKnown RBP14.97□□□□□ -0.01
ERCC3-209ENST00000494464 CCNE2O96020 404 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 RPLP2P05387 115 aaKnown RBP14.97□□□□□ -0.01
ERCC3-209ENST00000494464 KCNJ6P48051 423 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 MCM2P49736 904 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 FAM26DQ5JW98 314 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
ERCC3-209ENST00000494464 ZNF577Q9BSK1 485 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 SLC28A3Q9HAS3 691 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 TBC1D22BQ9NU19 505 aa14.97□□□□□ -0.01
ERCC3-209ENST00000494464 RRN3P2A6NIE6 340 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 M0R2N6 131 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 FOSL2P15408 326 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 DDIT3P35638 169 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 STAT5BP51692 787 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 USP11P51784 963 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 RABGGTBP53611 331 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.02
ERCC3-209ENST00000494464 NPY5RQ15761 445 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 TCTN1Q2MV58 587 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 PPP2R2DQ66LE6 453 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 ABHD15Q6UXT9 468 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 HERC6Q8IVU3 1022 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 BLIDQ8IZY5 108 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.02
ERCC3-209ENST00000494464 WDR81Q562E7 1941 aa14.96□□□□□ -0.02
ERCC3-209ENST00000494464 CHD7Q9P2D1 2997 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 DDX39AO00148 427 aaKnown RBP14.95□□□□□ -0.02
ERCC3-209ENST00000494464 EDIL3O43854 480 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 CTSHP09668 335 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 INSRRP14616 1297 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 IKBKEQ14164 716 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 PLCB4Q15147 1175 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 PRR16Q569H4 304 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 MARCH8Q5T0T0 291 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 FAM160B1Q5W0V3 765 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 ZNF746Q6NUN9 644 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-209ENST00000494464 SMAP1Q8IYB5 467 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-209ENST00000494464 AIFM3Q96NN9 605 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 CHMP5Q9NZZ3 219 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 TCEAL9Q9UHQ7 104 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 TRPC6Q9Y210 931 aa14.95□□□□□ -0.02
ERCC3-209ENST00000494464 COL4A6Q14031 1691 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 MYH9P35579 1960 aaKnown RBP14.94□□□□□ -0.02
ERCC3-209ENST00000494464 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 MYOGP15173 224 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 DEFB103AP81534 67 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 KRT76Q01546 638 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 MIS18BP1Q6P0N0 1132 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 MOXD1Q6UVY6 613 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 RSPH3Q86UC2 560 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 CCDC60Q8IWA6 550 aaPredicted RBP14.94□□□□□ -0.02
ERCC3-209ENST00000494464 DBF4BQ8NFT6 615 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 TBCKQ8TEA7 893 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 GTF3C6Q969F1 213 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 COL1A2P08123 1366 aa14.94□□□□□ -0.02
ERCC3-209ENST00000494464 CYP3A7-CYP3A51PA0A087WV96 503 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 POTEB3A0JP26 581 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 BACH1O14867 736 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 CTDNEP1O95476 244 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 CA3P07451 260 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 XBP1P17861 261 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 CYP3A7P24462 503 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 MGAT3Q09327 533 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 ME3Q16798 604 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 POTEBQ6S5H4 581 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 KRT25Q7Z3Z0 450 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 MAFAQ8NHW3 353 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms