RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TMX2Q9Y320 296 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 CDK5RAP2Q96SN8 1893 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 FOCADQ5VW36 1801 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 PTPRFP10586 1907 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
RIF1-211ENST00000494333 GIPC1O14908 333 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 FSCN2O14926 492 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 CNMDO75829 334 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
RIF1-211ENST00000494333 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
RIF1-211ENST00000494333 GNA15P30679 374 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 TDO2P48775 406 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 PDE1AP54750 535 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 CCNA1P78396 465 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 GRIK4Q16099 956 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 WDR78Q5VTH9 848 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 LBX2Q6XYB7 198 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 PLEKHH3Q7Z736 793 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 ALYREFQ86V81 257 aaKnown RBP9.62□□□□□ -0.87
RIF1-211ENST00000494333 MAP4K3Q8IVH8 894 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 IFNL3Q8IZI9 196 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 GALNT11Q8NCW6 608 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 GIPC2Q8TF65 315 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 LPAR1Q92633 364 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 SHISA4Q96DD7 197 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 TANGO6Q9C0B7 1094 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
RIF1-211ENST00000494333 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 HTTP42858 3142 aa9.62□□□□□ -0.87
RIF1-211ENST00000494333 ATAD5Q96QE3 1844 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 SALL3Q9BXA9 1300 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 LOC285556D6RIA3 1793 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 SOX1O00570 391 aaPredicted RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 TM4SF5O14894 197 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 IGHDP01880 384 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 HMGCRP04035 888 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 ESRRAP11474 423 aaPredicted RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 XRCC5P13010 732 aaKnown RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 IKBKEQ14164 716 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 HGSNATQ68CP4 663 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 ZNF444Q8N0Y2 327 aaPredicted RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 SOCS4Q8WXH5 440 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 TRIB2Q92519 343 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 EVI5LQ96CN4 794 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 FRMD6Q96NE9 622 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 LNPKQ9C0E8 428 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 CLEC4MQ9H2X3 399 aaPredicted RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 ZNF576Q9H609 170 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 EPB41L4AQ9HCS5 686 aaPredicted RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 STAP2Q9UGK3 403 aa9.61□□□□□ -0.87
RIF1-211ENST00000494333 SUPT16HQ9Y5B9 1047 aaKnown RBP9.61□□□□□ -0.87
RIF1-211ENST00000494333 KRBA1A5PL33 1030 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 DLL1O00548 723 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 PRDM1O75626 825 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 FLOT1O75955 427 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 RGS2P41220 211 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 PCDH1Q08174 1060 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 CCL14Q16627 93 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 ZNF423Q2M1K9 1284 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 SLC7A3Q8WY07 619 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 USP6NLQ92738 828 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 DPF3Q92784 378 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 WNT8BQ93098 351 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 MOV10L1Q9BXT6 1211 aaKnown RBP9.6□□□□□ -0.87
RIF1-211ENST00000494333 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.87
RIF1-211ENST00000494333 NAPBQ9H115 298 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 C12orf49Q9H741 205 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 PAK6Q9NQU5 681 aaPredicted RBP9.6□□□□□ -0.87
RIF1-211ENST00000494333 CENPFP49454 3210 aa9.6□□□□□ -0.87
RIF1-211ENST00000494333 SLC15A5A6NIM6 579 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 WDR46O15213 610 aaKnown RBP9.59□□□□□ -0.87
RIF1-211ENST00000494333 FARP2O94887 1054 aaPredicted RBP9.59□□□□□ -0.87
RIF1-211ENST00000494333 CAPN2P17655 700 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 DAB2P98082 770 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 PLS1Q14651 629 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 ATG4CQ96DT6 458 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 KLHDC7BQ96G42 594 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 SPATC1LQ9H0A9 340 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 NYAP2Q9P242 653 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 AK5Q9Y6K8 562 aa9.59□□□□□ -0.87
RIF1-211ENST00000494333 DDX60LQ5H9U9 1706 aaKnown RBP9.59□□□□□ -0.87
RIF1-211ENST00000494333 NAV1Q8NEY1 1877 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 F5H6K3 240 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 STRNO43815 780 aa9.58□□□□□ -0.88
RIF1-211ENST00000494333 SLC3A2P08195 630 aaKnown RBP9.58□□□□□ -0.88
RIF1-211ENST00000494333 ZKSCAN1P17029 563 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms