RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 SLC9A2Q9UBY0 812 aa27.32■■□□□ 1.96
TTC3-224ENST00000494243 FOSP01100 380 aaPredicted RBP27.31■■□□□ 1.96
TTC3-224ENST00000494243 INSRRP14616 1297 aa27.31■■□□□ 1.96
TTC3-224ENST00000494243 CDC27P30260 824 aa27.31■■□□□ 1.96
TTC3-224ENST00000494243 RSPH3Q86UC2 560 aa27.31■■□□□ 1.96
TTC3-224ENST00000494243 MRPL38Q96DV4 380 aaKnown RBP27.31■■□□□ 1.96
TTC3-224ENST00000494243 H3BNC9 293 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 COL9A1P20849 921 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 FBXO47Q5MNV8 452 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 TMEM192Q8IY95 271 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 ANO3Q9BYT9 981 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 UBE2ZQ9H832 354 aaPredicted RBP27.3■■□□□ 1.96
TTC3-224ENST00000494243 TMEM260Q9NX78 707 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 BARHL2Q9NY43 387 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 NFASCO94856 1347 aa27.3■■□□□ 1.96
TTC3-224ENST00000494243 KLF18A0A0U1RQI7 1052 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 SMCO2A6NFE2 343 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 RRN3P2A6NIE6 340 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 GOLGA8AA7E2F4 631 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 GOLGA8BA8MQT2 603 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 ENPP3O14638 875 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 CLK2P49760 499 aaKnown RBP27.29■■□□□ 1.96
TTC3-224ENST00000494243 ADCY7P51828 1080 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 ACTR2P61160 394 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 IGBP1P78318 339 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 ITGB3BPQ13352 177 aaPredicted RBP27.29■■□□□ 1.96
TTC3-224ENST00000494243 CEP55Q53EZ4 464 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 IL17RAQ96F46 866 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 AGO4Q9HCK5 861 aaKnown RBP27.29■■□□□ 1.96
TTC3-224ENST00000494243 CDY2AQ9Y6F7 541 aa27.29■■□□□ 1.96
TTC3-224ENST00000494243 BRWD1Q9NSI6 2320 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 hCG_1984214I3L0E3 225 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 MEIS1O00470 390 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 CDC45O75419 566 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 SREBF1P36956 1147 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 GPM6BQ13491 265 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 KRT32Q14532 448 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 ZNF713Q8N859 430 aaPredicted RBP27.28■■□□□ 1.96
TTC3-224ENST00000494243 SDF4Q9BRK5 362 aa27.28■■□□□ 1.96
TTC3-224ENST00000494243 AGO3Q9H9G7 860 aaKnown RBP27.28■■□□□ 1.96
TTC3-224ENST00000494243 ATG7O95352 703 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 LINC00271P0C7V0 271 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 RCAN1P53805 252 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 MRPS6P82932 125 aaKnown RBP27.27■■□□□ 1.96
TTC3-224ENST00000494243 PLCB4Q15147 1175 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 PLPPR4Q7Z2D5 763 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 AZI2Q9H6S1 392 aa27.27■■□□□ 1.96
TTC3-224ENST00000494243 RC3H2Q9HBD1 1191 aaKnown RBP27.27■■□□□ 1.96
TTC3-224ENST00000494243 CPA1P15085 419 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 ADD1P35611 737 aaKnown RBP27.26■■□□□ 1.95
TTC3-224ENST00000494243 STAT5BP51692 787 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 AP3B2Q13367 1082 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 PTPROQ16827 1216 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 TSHZ1Q6ZSZ6 1077 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 TRAPPC12Q8WVT3 735 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 KCNB2Q92953 911 aa27.26■■□□□ 1.95
TTC3-224ENST00000494243 FAM49AQ9H0Q0 323 aaPredicted RBP27.26■■□□□ 1.95
TTC3-224ENST00000494243 CCNE2O96020 404 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 HMGB1P09429 215 aaKnown RBP27.25■■□□□ 1.95
TTC3-224ENST00000494243 LEXMQ3ZCV2 418 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 FIBCD1Q8N539 461 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 LINC01599Q8WXQ3 324 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 RAPGEFL1Q9UHV5 662 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 TRPC6Q9Y210 931 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 PCDHA2Q9Y5H9 948 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 NLRC5Q86WI3 1866 aa27.25■■□□□ 1.95
TTC3-224ENST00000494243 IGKV6D-21A0A0A0MT36 114 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 ADAMTS3O15072 1205 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 RPLP2P05387 115 aaKnown RBP27.24■■□□□ 1.95
TTC3-224ENST00000494243 KCNA5P22460 613 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 NIPA1Q7RTP0 329 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 RTN4RL1Q86UN2 441 aaPredicted RBP27.24■■□□□ 1.95
TTC3-224ENST00000494243 BANK1Q8NDB2 785 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.24■■□□□ 1.95
TTC3-224ENST00000494243 CRYGNQ8WXF5 182 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 ZNF689Q96CS4 500 aaPredicted RBP27.24■■□□□ 1.95
TTC3-224ENST00000494243 GLT8D2Q9H1C3 349 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 SQORQ9Y6N5 450 aa27.24■■□□□ 1.95
TTC3-224ENST00000494243 RALGAPA2Q2PPJ7 1873 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 FAM86B1E9PN63 330 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 C5orf67F2Z3F1 127 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 FAM86B2P0C5J1 330 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 CD52P31358 61 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 PFKFB3Q16875 520 aaPredicted RBP27.23■■□□□ 1.95
TTC3-224ENST00000494243 IER5Q5VY09 327 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 CRIPAKQ8N1N5 446 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 TNPO1Q92973 898 aaKnown RBP27.23■■□□□ 1.95
TTC3-224ENST00000494243 EPHX3Q9H6B9 360 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 CD320Q9NPF0 282 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 TTC3P53804 2025 aa27.23■■□□□ 1.95
TTC3-224ENST00000494243 ADGRA3Q8IWK6 1321 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 POTEB3A0JP26 581 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 BMPR1AP36894 532 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 TMEM62Q0P6H9 643 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 APOBRQ0VD83 1088 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 TIGD5Q53EQ6 642 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 JAKMIP3Q5VZ66 844 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 POTEBQ6S5H4 581 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 ABHD15Q6UXT9 468 aa27.22■■□□□ 1.95
TTC3-224ENST00000494243 KHSRPQ92945 711 aaKnown RBP eCLIP27.22■■□□□ 1.952e-7■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms