RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-204ENST00000494183 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 CSPG5O95196 566 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 CDC25BP30305 580 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 DYDC2Q96IM9 177 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 MYO3AQ8NEV4 1616 aa12.68□□□□□ -0.38
COL25A1-204ENST00000494183 LAMC1P11047 1609 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 OAS2P29728 719 aaKnown RBP12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ABCD1P33897 745 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 KRT76Q01546 638 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
COL25A1-204ENST00000494183 FLT1P17948 1338 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 SH3BP5O60239 455 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ATP2A3Q93084 1043 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 GOLPH3LQ9H4A5 285 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
COL25A1-204ENST00000494183 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ZNF609O15014 1411 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 CLDN3O15551 220 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 NDUFA10O95299 355 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 FTCDO95954 541 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ALCAMQ13740 583 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ZNF394Q53GI3 561 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 ALKBH5Q6P6C2 394 aaKnown RBP12.67□□□□□ -0.38
COL25A1-204ENST00000494183 GSDMBQ8TAX9 411 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-204ENST00000494183 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
COL25A1-204ENST00000494183 PRCPP42785 496 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
COL25A1-204ENST00000494183 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
COL25A1-204ENST00000494183 MAPK6Q16659 721 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 SWSAP1Q6NVH7 229 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 P3H4Q92791 437 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 ZNF668Q96K58 619 aaPredicted RBP12.66□□□□□ -0.38
COL25A1-204ENST00000494183 ZDHHC9Q9Y397 364 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 A6NNZ2 444 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 MYO1EQ12965 1108 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 TUBB8Q3ZCM7 444 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL25A1-204ENST00000494183 IGDCC4Q8TDY8 1250 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 FAM81BQ96LP2 452 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 AFG3L2Q9Y4W6 797 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 KIF28PB7ZC32 967 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 ARPP19P56211 112 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 PFDN4Q9NQP4 134 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 GABBR1Q9UBS5 961 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 MAD1L1Q9Y6D9 718 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 SLC16A4O15374 487 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 OATP04181 439 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
COL25A1-204ENST00000494183 RFX1P22670 979 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 DNAJC24Q6P3W2 148 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 FBXO33Q7Z6M2 555 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 XXYLT1Q8NBI6 393 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 TRIM11Q96F44 468 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
COL25A1-204ENST00000494183 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 ZMYND10O75800 440 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 NDUFB10O96000 172 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 ATF2P15336 505 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 STX2P32856 288 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 KIF11P52732 1056 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 METTL23Q86XA0 190 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 CALN1Q9BXU9 219 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
COL25A1-204ENST00000494183 USP42Q9H9J4 1324 aaKnown RBP12.65□□□□□ -0.38
COL25A1-204ENST00000494183 NEDD9Q14511 834 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 OR6B2Q6IFH4 312 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 KSR1Q8IVT5 923 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 KIF2CQ99661 725 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 ATP6V0A4Q9HBG4 840 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 MRPL47Q9HD33 250 aaKnown RBP12.65□□□□□ -0.38
COL25A1-204ENST00000494183 PLCB1Q9NQ66 1216 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 GCLMP48507 274 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 ZNF543Q08ER8 600 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms