RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CYP2E1P05181 493 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CUL1Q13616 776 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 PFKFB3Q16875 520 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CIAPIN1Q6FI81 312 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 TOGARAM2Q6ZUX3 1019 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 TAB3Q8N5C8 712 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 SDCCAG3Q96C92 435 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CPSF3Q9UKF6 684 aaKnown RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 DIXDC1Q155Q3 683 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 JADE1Q6IE81 842 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CFAP61Q8NHU2 1237 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 TTC36A6NLP5 189 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 LGALS16A8MUM7 142 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-207ENST00000494090 F8W8V4 182 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 GLE1Q53GS7 698 aaKnown RBP20.67■□□□□ 0.9
COL27A1-207ENST00000494090 SLFN12LQ6IEE8 588 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 DNAJC24Q6P3W2 148 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 ELMSAN1Q6PJG2 1045 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 C4orf50Q6ZRC1 276 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 FAM8A1Q9UBU6 413 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 SYNJ2BP-COX16A0A087WUM0 186 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 LUC7L3O95232 432 aaKnown RBP20.67■□□□□ 0.9
COL27A1-207ENST00000494090 SNX1Q13596 522 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 ABHD10Q9NUJ1 306 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 COX16Q9P0S2 106 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 ZDHHC9Q9Y397 364 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 CTNND1O60716 968 aaKnown RBP20.67■□□□□ 0.9
COL27A1-207ENST00000494090 BAG2O95816 211 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 MXI1P50539 228 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 TRIM68Q6AZZ1 485 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 GBP7Q8N8V2 638 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-207ENST00000494090 LRRC4Q9HBW1 653 aa20.67■□□□□ 0.9
COL27A1-207ENST00000494090 NEK9Q8TD19 979 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 DALRD3Q5D0E6 543 aaKnown RBP20.66■□□□□ 0.9
COL27A1-207ENST00000494090 ALKBH5Q6P6C2 394 aaKnown RBP20.66■□□□□ 0.9
COL27A1-207ENST00000494090 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 NR1D1P20393 614 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 TFAMQ00059 246 aaKnown RBP20.66■□□□□ 0.9
COL27A1-207ENST00000494090 DR1Q01658 176 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 EP400NLQ6ZTU2 488 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 PRKAG2Q9UGJ0 569 aa20.66■□□□□ 0.9
COL27A1-207ENST00000494090 SART1O43290 800 aaKnown RBP20.65■□□□□ 0.9
COL27A1-207ENST00000494090 ALX1Q15699 326 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
COL27A1-207ENST00000494090 ANGPTL3Q9Y5C1 460 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 A2ML1A8K2U0 1454 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 TSGA10IPQ3SY00 556 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 KIAA1841Q6NSI8 718 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 NLRP7Q8WX94 980 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 LY9Q9HBG7 655 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 DIS3Q9Y2L1 958 aaKnown RBP20.65■□□□□ 0.9
COL27A1-207ENST00000494090 CCDC188H7C350 402 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 CYP27B1O15528 508 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 KRT1P04264 644 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 SKA2Q8WVK7 121 aaPredicted RBP20.65■□□□□ 0.9
COL27A1-207ENST00000494090 FMO2Q99518 471 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 MYO3BQ8WXR4 1341 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 CDHR2Q9BYE9 1310 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 CPP00450 1065 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 STX1BP61266 288 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 DCAF4Q8WV16 495 aa20.65■□□□□ 0.9
COL27A1-207ENST00000494090 ASNSP08243 561 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 DDIT3P35638 169 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 RHOT2Q8IXI1 618 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 PROM2Q8N271 834 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 MASTLQ96GX5 879 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 ADAMTS1Q9UHI8 967 aa20.64■□□□□ 0.9
COL27A1-207ENST00000494090 ANO9A1A5B4 782 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 SLC7A5Q01650 507 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 CEP72Q9P209 647 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 HLFQ16534 295 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 MMEL1Q495T6 779 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 TCP11Q8WWU5 503 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 MID2Q9UJV3 735 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 GLI2P10070 1586 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 LDHAP00338 332 aaKnown RBP20.64■□□□□ 0.89
COL27A1-207ENST00000494090 PNPLA6Q8IY17 1366 aa20.64■□□□□ 0.89
COL27A1-207ENST00000494090 NOVA2Q9UNW9 492 aaKnown RBP20.64■□□□□ 0.89
COL27A1-207ENST00000494090 RASGRF2O14827 1237 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 TTC4O95801 387 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 SAT1P21673 171 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 MSH2P43246 934 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 JAK3P52333 1124 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 FBXO40Q9UH90 709 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 NFKBIAP25963 317 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 PDXDC2PQ6P474 469 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 SIX6OS1Q8N1H7 587 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 ACTN1P12814 892 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 TMED2Q15363 201 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 TTLL6Q8N841 843 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 ACTR5Q9H9F9 607 aaPredicted RBP20.63■□□□□ 0.89
COL27A1-207ENST00000494090 DONSONQ9NYP3 566 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 RAPH1Q70E73 1250 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 MXD3Q9BW11 206 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 ZMYND12Q9H0C1 365 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms