RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TAF4BQ92750 862 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 PBKQ96KB5 322 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
RFC4-214ENST00000494047 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
RFC4-214ENST00000494047 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
RFC4-214ENST00000494047 A0A0A6YYK5 440 aaPredicted RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 TRAF5O00463 557 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 PDXKO00764 312 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 ENC1O14682 589 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 CUL1Q13616 776 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 NAB2Q15742 525 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 DNAJC21Q5F1R6 531 aaKnown RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 SH3GL2Q99962 352 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 KCND2Q9NZV8 630 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
RFC4-214ENST00000494047 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
RFC4-214ENST00000494047 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 RASSF10A6NK89 507 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 CCDC188H7C350 402 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
RFC4-214ENST00000494047 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
RFC4-214ENST00000494047 CDR1P51861 262 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 NPEPPSP55786 919 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 MTMR3Q13615 1198 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 ASIC2Q16515 512 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 Q4G0T1 1027 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 STRIP1Q5VSL9 837 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 MICALCLQ6ZW33 695 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 CD302Q8IX05 232 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 EFCAB13Q8IY85 973 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 C3orf20Q8ND61 904 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 MKL1Q969V6 931 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
RFC4-214ENST00000494047 KANSL2Q9H9L4 492 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 KCNMB3Q9NPA1 279 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 SEL1LQ9UBV2 794 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 PGAP2Q9UHJ9 254 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
RFC4-214ENST00000494047 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 GOLGA6L10A6NI86 522 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 EIF3DO15371 548 aaKnown RBP eCLIP12.6□□□□□ -0.39
RFC4-214ENST00000494047 PLA2G4BP0C869 781 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 GBP1P32455 592 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 PRKCIP41743 596 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 EMC10Q5UCC4 262 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 RSBN1LQ6PCB5 846 aaPredicted RBP12.6□□□□□ -0.39
RFC4-214ENST00000494047 CROCCP2Q86T23 111 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 ADGRF4Q8IZF3 695 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 ATRIPQ8WXE1 791 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 LRRC45Q96CN5 670 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
RFC4-214ENST00000494047 PLIN2Q99541 437 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 TRIM10Q9UDY6 481 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 DNM3Q9UQ16 869 aa12.6□□□□□ -0.39
RFC4-214ENST00000494047 RRP15Q9Y3B9 282 aaKnown RBP12.6□□□□□ -0.39
RFC4-214ENST00000494047 POTEMA6NI47 508 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 SLC37A4O43826 429 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 TDP2O95551 362 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 SYF2O95926 243 aaKnown RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 RPA1P27694 616 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 SKOR1P84550 965 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 HGSNATQ68CP4 663 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms