RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MMEP08473 750 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TRAF7Q6Q0C0 670 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 KBTBD3Q8NAB2 608 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TUBGCP3Q96CW5 907 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TUBGCP2Q9BSJ2 902 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 SH3TC1Q8TE82 1336 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 HAUS5O94927 633 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 IMPDH2P12268 514 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ARPP19P56211 112 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 AP1B1Q10567 949 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 NR1H3Q13133 447 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 RARS2Q5T160 578 aaKnown RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 RNF219Q5W0B1 726 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ARMCX2Q7L311 632 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TTC30BQ8N4P2 665 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TDRD7Q8NHU6 1098 aaKnown RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 OTULINQ96BN8 352 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 FAM227BQ96M60 508 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ELAC2Q9BQ52 826 aaKnown RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 DONSONQ9NYP3 566 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ADA2Q9NZK5 511 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 PRG3Q9Y2Y8 225 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 E7EWF7 191 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 SGSM2O43147 1006 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 KRT38O76015 456 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 DEFA1P59665 94 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 DEFA3P59666 94 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 RAB14P61106 215 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF555Q8NEP9 628 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 PI4K2BQ8TCG2 481 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 CASS4Q9NQ75 786 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 FRMPD2Q68DX3 1309 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 PI4K2BG5E9Z4 385 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 CHUKO15111 745 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ZMYND10O75800 440 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ZSCAN20P17040 1043 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 IL10P22301 178 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 HDLBPQ00341 1268 aaKnown RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 GOLGA8DPQ0D2H9 430 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 MAPRE2Q15555 327 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 KIAA1755Q5JYT7 1200 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 BTNL9Q6UXG8 535 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 GADL1Q6ZQY3 521 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TTC8Q8TAM2 541 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ZFP42Q96MM3 310 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ZMYM6O95789 1325 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 PLEKHG3A1L390 1219 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 UBXN8O00124 270 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 LZTS3O60299 673 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-221ENST00000493795 ARIH2O95376 493 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 MIS18BP1Q6P0N0 1132 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 STAMBPL1Q96FJ0 436 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 CNBD2Q96M20 576 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 C8orf37Q96NL8 207 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 OSBPL1AQ9BXW6 950 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 RUBCNLQ9H714 662 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 USP40Q9NVE5 1235 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 PKD2L2Q9NZM6 624 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 MPP6Q9NZW5 540 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 TRAF3IP3Q9Y228 551 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 RASSF10A6NK89 507 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 BNIP3LO60238 219 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 PYGMP11217 842 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 NR2F2P24468 414 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 RECQLP46063 649 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 ARL4CP56559 192 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 DCAF15Q66K64 600 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TTC23LQ6PF05 361 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 IFT43Q96FT9 208 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF274Q96GC6 653 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 DHTKD1Q96HY7 919 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 METTL22Q9BUU2 404 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TMEM245Q9H330 911 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TMEM206Q9H813 350 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 ZBTB40Q9NUA8 1239 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 EHD2Q9NZN4 543 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 DIS3Q9Y2L1 958 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TSC22D4Q9Y3Q8 395 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 WDR17Q8IZU2 1322 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 LAD1O00515 517 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 DDAH1O94760 285 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 MAGEA9P43362 315 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 POLA2Q14181 598 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 FAM89AQ96GI7 184 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 FTOQ9C0B1 505 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 KMT5AQ9NQR1 393 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 GEMIN8Q9NWZ8 242 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 BRD1O95696 1058 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 FOSP01100 380 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF18P17022 549 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 C4BPBP20851 252 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 MAP4P27816 1152 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms