RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 STXBP3O00186 592 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 GHRP10912 638 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 FUT2Q10981 343 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 AP3B2Q13367 1082 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 TYW1BQ6NUM6 668 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 RASEFQ8IZ41 740 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 TNPO1Q92973 898 aaKnown RBP18.99■□□□□ 0.63
PTPRU-208ENST00000493601 ANO3Q9BYT9 981 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 BARHL2Q9NY43 387 aa18.99■□□□□ 0.63
PTPRU-208ENST00000493601 V9GY48 417 aaPredicted RBP18.99■□□□□ 0.63
PTPRU-208ENST00000493601 RRN3P2A6NIE6 340 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 FGD1P98174 961 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 MGAT3Q09327 533 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 PTPROQ16827 1216 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 EPC2Q52LR7 807 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 CEP55Q53EZ4 464 aa18.98■□□□□ 0.63
PTPRU-208ENST00000493601 BRWD1Q9NSI6 2320 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 SREBF1P36956 1147 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 ACTR2P61160 394 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 IGBP1P78318 339 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 LPIN1Q14693 890 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 MARCH8Q5T0T0 291 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 DNAJB3Q8WWF6 145 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 MRPL38Q96DV4 380 aaKnown RBP18.97■□□□□ 0.63
PTPRU-208ENST00000493601 PGBD1Q96JS3 809 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 NAP1L2Q9ULW6 460 aaPredicted RBP18.97■□□□□ 0.63
PTPRU-208ENST00000493601 TRPC6Q9Y210 931 aa18.97■□□□□ 0.63
PTPRU-208ENST00000493601 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 INSRRP14616 1297 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 MRPS6P82932 125 aaKnown RBP18.96■□□□□ 0.63
PTPRU-208ENST00000493601 TIGD5Q53EQ6 642 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 FBXO47Q5MNV8 452 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 TSHZ1Q6ZSZ6 1077 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 PLPPR4Q7Z2D5 763 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 CYP2W1Q8TAV3 490 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 PCYT2Q99447 389 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 AGO4Q9HCK5 861 aaKnown RBP18.96■□□□□ 0.63
PTPRU-208ENST00000493601 CDY2AQ9Y6F7 541 aa18.96■□□□□ 0.63
PTPRU-208ENST00000493601 H3BNC9 293 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 M0QZ92 97 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 ARP10275 920 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 CDC27P30260 824 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 CLK2P49760 499 aaKnown RBP18.95■□□□□ 0.62
PTPRU-208ENST00000493601 SLC26A2P50443 739 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 METAP2P50579 478 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTPRU-208ENST00000493601 IER5Q5VY09 327 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 NIPA1Q7RTP0 329 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 TMEM192Q8IY95 271 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 IL17RAQ96F46 866 aa18.95■□□□□ 0.62
PTPRU-208ENST00000493601 FAM49AQ9H0Q0 323 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-208ENST00000493601 UBE2ZQ9H832 354 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-208ENST00000493601 FAM217BQ9NTX9 383 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-208ENST00000493601 MEIS1O00470 390 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 ZNF76P36508 570 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 STAT5BP51692 787 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 ITGB3BPQ13352 177 aaPredicted RBP18.94■□□□□ 0.62
PTPRU-208ENST00000493601 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
PTPRU-208ENST00000493601 FIBCD1Q8N539 461 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 TMEM260Q9NX78 707 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 RWDD3Q9Y3V2 267 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 ADGRA3Q8IWK6 1321 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 LOXHD1Q8IVV2 1947 aa18.94■□□□□ 0.62
PTPRU-208ENST00000493601 NID2Q14112 1375 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 TTC3P53804 2025 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 POTEB3A0JP26 581 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 SCG2P13521 617 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 GPM6BQ13491 265 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 MCTP2Q6DN12 878 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 POTEBQ6S5H4 581 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
PTPRU-208ENST00000493601 JAKMIP1Q96N16 626 aaKnown RBP18.93■□□□□ 0.62
PTPRU-208ENST00000493601 PCDHA2Q9Y5H9 948 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 SQORQ9Y6N5 450 aa18.93■□□□□ 0.62
PTPRU-208ENST00000493601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.92■□□□□ 0.62
PTPRU-208ENST00000493601 ESYT2A0FGR8 921 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 ATG7O95352 703 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 CTNNB1P35222 781 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 APOBRQ0VD83 1088 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 LEXMQ3ZCV2 418 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 FAM160B1Q5W0V3 765 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 Q6ZUG5 572 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 KCNB2Q92953 911 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 ZBTB10Q96DT7 871 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 C11orf84Q9BUA3 381 aaPredicted RBP18.92■□□□□ 0.62
PTPRU-208ENST00000493601 C1QTNF1Q9BXJ1 281 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 FTHL17Q9BXU8 183 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 RC3H2Q9HBD1 1191 aaKnown RBP18.92■□□□□ 0.62
PTPRU-208ENST00000493601 TRPV2Q9Y5S1 764 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 ATG2AQ2TAZ0 1938 aa18.92■□□□□ 0.62
PTPRU-208ENST00000493601 C5orf67F2Z3F1 127 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 ENPP3O14638 875 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 BACH1O14867 736 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 COL9A1P20849 921 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 KCNA5P22460 613 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 CD52P31358 61 aa18.91■□□□□ 0.62
PTPRU-208ENST00000493601 ADD1P35611 737 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms