RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ZNF232Q9UNY5 417 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 BAZ2BQ9UIF8 2168 aaKnown RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 AP5Z1O43299 807 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 RAD17O75943 681 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 GH2P01242 217 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 VEGFAP15692 232 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 UBASH3AP57075 661 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KCNMA1Q12791 1236 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 PTK7Q13308 1070 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 TPD52L1Q16890 204 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 ZNF658Q5TYW1 1059 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 CABP7Q86V35 215 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 ZFPM1Q8IX07 1006 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KIAA1524Q8TCG1 905 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 ZBED3Q96IU2 234 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-206ENST00000493553 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
PRPF3-206ENST00000493553 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 CYP3A7-CYP3A51PA0A087WV96 503 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 RNF225M0QZC1 329 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 PSMA7O14818 248 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 NDUFB10O96000 172 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 BMP4P12644 408 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 SFPQP23246 707 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 CYP3A7P24462 503 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 AFMP43652 599 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 STAT2P52630 851 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 CACNB3P54284 484 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 CDC37Q16543 378 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 CRTC2Q53ET0 693 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 JAKMIP3Q5VZ66 844 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 USP49Q70CQ1 688 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 KBTBD4Q9NVX7 518 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-206ENST00000493553 LRWD1Q9UFC0 647 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 RWDD2AQ9UIY3 292 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 FEM1BQ9UK73 627 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
PRPF3-206ENST00000493553 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 BICDL2A1A5D9 508 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 TCP10L2B9ZVM9 353 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L22D6RA61 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L17D6RBQ6 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L19D6RCP7 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L20D6RJB6 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 H7C1D1 291 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 TPM2P07951 284 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 TPM1P09493 284 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 FAM157BP0CG42 384 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 MYH8P13535 1937 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 PTGS1P23219 599 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 TNP2Q05952 138 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 CXCL9Q07325 125 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 USP17L24Q0WX57 530 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 C1orf53Q5VUE5 145 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 FOXR2Q6PJQ5 311 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 KCTD1Q719H9 257 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 LRRC8AQ8IWT6 810 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 LPAR1Q92633 364 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-206ENST00000493553 COA7Q96BR5 231 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 DHTKD1Q96HY7 919 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-206ENST00000493553 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 FAM20AQ96MK3 541 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 C7orf25Q9BPX7 421 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 XPO4Q9C0E2 1151 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms