RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 SNAP25P60880 206 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 KCNJ12Q14500 433 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 ERCC6LQ2NKX8 1250 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 ADGRF4Q8IZF3 695 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 ANKRD7Q92527 254 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 TMEM39BQ9GZU3 492 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 RIOX1Q9H6W3 641 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 RMND1Q9NWS8 449 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 RBPJLQ9UBG7 517 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 RWDD2AQ9UIY3 292 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
HERC4-211ENST00000492996 RNF225M0QZC1 329 aaPredicted RBP7.81□□□□□ -1.16
HERC4-211ENST00000492996 ZSCAN12O43309 604 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 MARCH6O60337 910 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 STX10O60499 249 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 FCER1AP12319 257 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 COPB1P53618 953 aaKnown RBP7.81□□□□□ -1.16
HERC4-211ENST00000492996 PDE4DQ08499 809 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 TRIM65Q6PJ69 517 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 DYMQ7RTS9 669 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 WDR24Q96S15 920 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 NUP88Q99567 741 aaPredicted RBP7.81□□□□□ -1.16
HERC4-211ENST00000492996 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
HERC4-211ENST00000492996 CCSER1Q9C0I3 900 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.81□□□□□ -1.16
HERC4-211ENST00000492996 JMJD4Q9H9V9 463 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 MROH7Q68CQ1 1323 aa7.81□□□□□ -1.16
HERC4-211ENST00000492996 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 GDF11O95390 407 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 CD4P01730 458 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 GJA9P57773 515 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 UBXN1Q04323 297 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 ZNF543Q08ER8 600 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 RRP1BQ14684 758 aaKnown RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 CALCRLQ16602 461 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 ASPRV1Q53RT3 343 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 RAD9BQ6WBX8 426 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 C10orf67Q8IYJ2 551 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 ANKRD20A12PQ8NF67 263 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 KCNN1Q92952 543 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 CTAGE1Q96RT6 745 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 RASSF4Q9H2L5 321 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 KCND1Q9NSA2 647 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 LRWD1Q9UFC0 647 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 CCP110O43303 1012 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 KLRC4O43908 158 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 GYPCP04921 128 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 IDEP14735 1019 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 TAL1P17542 331 aaPredicted RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 KCNJ6P48051 423 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 STK4Q13043 487 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 IKQ13123 557 aaPredicted RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 TCP11X2Q5H9J9 407 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 ADSSL1Q8N142 457 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 NUDT12Q9BQG2 462 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 MRPL44Q9H9J2 332 aaKnown RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 KBTBD4Q9NVX7 518 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 SSBP05455 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
HERC4-211ENST00000492996 CCNA1P78396 465 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 MCM6Q14566 821 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 USP17L6PQ6QN14 398 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 IRF2BP1Q8IU81 584 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 GPIHBP1Q8IV16 184 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 PIAS4Q8N2W9 510 aaPredicted RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 CDK5RAP3Q96JB5 506 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 MMTAG2Q9BU76 263 aaKnown RBP7.8□□□□□ -1.16
HERC4-211ENST00000492996 TRIM9Q9C026 710 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 SLC39A2Q9NP94 309 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 EXOC1Q9NV70 894 aa7.8□□□□□ -1.16
HERC4-211ENST00000492996 LAD1O00515 517 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 PSMA7O14818 248 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 MFAP3LO75121 409 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 TPM1P09493 284 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 EEF2P13639 858 aaKnown RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 KRT9P35527 623 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 STIM1Q13586 685 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 SEPT2Q15019 361 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 TAF1CQ15572 869 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 FAM160B2Q86V87 743 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 KRT222Q8N1A0 295 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 CALML4Q96GE6 196 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 WRNIP1Q96S55 665 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 CARD6Q9BX69 1037 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.79□□□□□ -1.16
HERC4-211ENST00000492996 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 PBX1P40424 430 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 PRPHP41219 470 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 SLC1A4P43007 532 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 CERKLQ49MI3 558 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 CT47A1Q5JQC4 288 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 CSGALNACT2Q8N6G5 542 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 ACRBPQ8NEB7 543 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 MNS1Q8NEH6 495 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 DCAF4Q8WV16 495 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 FGD4Q96M96 766 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 ASCC2Q9H1I8 757 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 EPC1Q9H2F5 836 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms