RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
CCM2-217ENST00000492883 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 SYT1P21579 422 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 TXKP42681 527 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 SLC26A2P50443 739 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 ZNF200P98182 395 aaPredicted RBP15.75■□□□□ 0.11
CCM2-217ENST00000492883 MDM2Q00987 491 aaPredicted RBP15.75■□□□□ 0.11
CCM2-217ENST00000492883 TRMT1LQ7Z2T5 733 aaKnown RBP15.75■□□□□ 0.11
CCM2-217ENST00000492883 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
CCM2-217ENST00000492883 RDM1Q8NG50 284 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 HIPK3Q9H422 1215 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 PCDH10Q9P2E7 1040 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 PCDHA12Q9UN75 941 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 TRPC6Q9Y210 931 aa15.75■□□□□ 0.11
CCM2-217ENST00000492883 NRCAMQ92823 1304 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 POTEB3A0JP26 581 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 TIMP1P01033 207 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 ITGB8P26012 769 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 PPFIA1Q13136 1202 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 PPP2R5CQ13362 524 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
CCM2-217ENST00000492883 PLCB4Q15147 1175 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 RILPL1Q5EBL4 403 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 POTEBQ6S5H4 581 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 BADQ92934 168 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
CCM2-217ENST00000492883 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
CCM2-217ENST00000492883 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
CCM2-217ENST00000492883 INSRRP14616 1297 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 CYP2C18P33260 490 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 MAGEA10P43363 369 aaPredicted RBP15.73■□□□□ 0.11
CCM2-217ENST00000492883 TOB1P50616 345 aaPredicted RBP15.73■□□□□ 0.11
CCM2-217ENST00000492883 IGBP1P78318 339 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 BFSP2Q13515 415 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 HIC1Q14526 733 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 NBR1Q14596 966 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 GRIK4Q16099 956 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 NCAPH2Q6IBW4 605 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 B3GNT9Q6UX72 402 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 FERMT3Q86UX7 667 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 RETREG2Q8NC44 543 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
CCM2-217ENST00000492883 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 VAV3Q9UKW4 847 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 PCDHB6Q9Y5E3 794 aa15.73■□□□□ 0.11
CCM2-217ENST00000492883 RRN3P2A6NIE6 340 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 EML1O00423 815 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 TREHO43280 583 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 STX6O43752 255 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 HBP1O60381 514 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 OR52Z1P0C646 297 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 PTK7Q13308 1070 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 BECN1Q14457 450 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 BRAPQ7Z569 592 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 CCDC155Q8N6L0 562 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 ATP8B4Q8TF62 1192 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 LMBR1Q8WVP7 490 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 NRBP2Q9NSY0 501 aa15.72■□□□□ 0.11
CCM2-217ENST00000492883 ATP4AP20648 1035 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 TECP42680 631 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 CCL23P55773 120 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 EPHA7Q15375 998 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 MFSD5Q6N075 450 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 BANK1Q8NDB2 785 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 CAGE1Q8TC20 777 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 BBXQ8WY36 941 aaPredicted RBP15.71■□□□□ 0.11
CCM2-217ENST00000492883 FAM167AQ96KS9 214 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 GDF15Q99988 308 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 MTMR6Q9Y217 621 aa15.71■□□□□ 0.11
CCM2-217ENST00000492883 UMODL1Q5DID0 1318 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 DKC1O60832 514 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCM2-217ENST00000492883 P4HBP07237 508 aaKnown RBP15.7■□□□□ 0.1
CCM2-217ENST00000492883 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
CCM2-217ENST00000492883 HOXC8P31273 242 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 PSMC5P62195 406 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 FPGSQ05932 587 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 PTGDRQ13258 359 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 UGCGQ16739 394 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 ZNF484Q5JVG2 852 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 SERINC5Q86VE9 423 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 UBE2OQ9C0C9 1292 aaKnown RBP15.7■□□□□ 0.1
CCM2-217ENST00000492883 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.7■□□□□ 0.1
CCM2-217ENST00000492883 TUBE1Q9UJT0 475 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 CEP131Q9UPN4 1083 aa15.7■□□□□ 0.1
CCM2-217ENST00000492883 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 ZNF862O60290 1169 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 OATP04181 439 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 CSF2RAP15509 400 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 THPOP40225 353 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
CCM2-217ENST00000492883 ADAM17P78536 824 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 PRKCEQ02156 737 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 SPIRE1Q08AE8 756 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 TMEM266Q2M3C6 531 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms