RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 LMBR1Q8WVP7 490 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 DHX38Q92620 1227 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 RNPC3Q96LT9 517 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 PCYT2Q99447 389 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■□□□□ 9.3
CDC42SE1-206ENST00000492796 TEKT3Q9BXF9 490 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 TRIP12Q14669 1992 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 SCN5AQ14524 2016 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 BACH1O14867 736 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 TREHO43280 583 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 GAS7O60861 476 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 PSAPP07602 524 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 CKBP12277 381 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 MARK3P27448 753 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 SFNP31947 248 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 JAK3P52333 1124 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 ADAM17P78536 824 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 ZNF200P98182 395 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 GRIK4Q16099 956 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 TRIM71Q2Q1W2 868 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 TMEM240Q5SV17 173 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 LRCH2Q5VUJ6 765 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 LRRC8DQ7L1W4 858 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 ETNPPLQ8TBG4 499 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 SCLYQ96I15 445 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 ZNF302Q9NR11 478 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 SETD4Q9NVD3 440 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 WDR81Q562E7 1941 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 IGSF9BQ9UPX0 1349 aa12.05□□□□□ -0.48
CDC42SE1-206ENST00000492796 RANBP2P49792 3224 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 MBLAC1A4D2B0 266 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 BTBD18B2RXH4 712 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 TBX3O15119 743 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 SLC37A4O43826 429 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 PSMD10O75832 226 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 ACRP10323 421 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 FOSBP53539 338 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 RASIP1Q5U651 963 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 C16orf59Q7L2K0 433 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 FBXO18Q8NFZ0 1043 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 ATP8B4Q8TF62 1192 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 KCNMB3Q9NPA1 279 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 TUBE1Q9UJT0 475 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 SAMM50Q9Y512 469 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 MYH9P35579 1960 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 COL1A2P08123 1366 aa12.04□□□□□ -0.48
CDC42SE1-206ENST00000492796 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 HBP1O60381 514 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 FGBP02675 491 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 ACTN1P12814 892 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 INSRRP14616 1297 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 THPOP40225 353 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 SWSAP1Q6NVH7 229 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 B3GNT9Q6UX72 402 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 SLFN12Q8IYM2 578 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 HERVK_113Q902F9 699 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 WNT8BQ93098 351 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 FAM167AQ96KS9 214 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 FAM20AQ96MK3 541 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 UNC45AQ9H3U1 944 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 DISC1Q9NRI5 854 aa12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-206ENST00000492796 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 CHMP2AO43633 222 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 CXCL10P02778 98 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 PPP2R5CQ13362 524 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms