RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 EYA4O95677 639 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 GHRP10912 638 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 ARHGAP4P98171 946 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 PDE4CQ08493 712 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
HDAC3-213ENST00000492506 NEDD9Q14511 834 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 LPIN1Q14693 890 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
HDAC3-213ENST00000492506 RUFY4Q6ZNE9 571 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 CRIPAKQ8N1N5 446 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 PIGSQ96S52 555 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 IGFLR1Q9H665 355 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 RIOX1Q9H6W3 641 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
HDAC3-213ENST00000492506 CLEC1BQ9P126 229 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 PLAGL2Q9UPG8 496 aa15.13■□□□□ 0.01
HDAC3-213ENST00000492506 CYTH3O43739 400 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 STAM2O75886 525 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
HDAC3-213ENST00000492506 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 KRT23Q9C075 422 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 ZNF215Q9UL58 517 aaPredicted RBP15.12■□□□□ 0.01
HDAC3-213ENST00000492506 NRCAMQ92823 1304 aa15.12■□□□□ 0.01
HDAC3-213ENST00000492506 ZFHX2Q9C0A1 2572 aaPredicted RBP15.12■□□□□ 0.01
HDAC3-213ENST00000492506 FNDC1Q4ZHG4 1894 aaPredicted RBP15.12■□□□□ 0.01
HDAC3-213ENST00000492506 TMEM221A6NGB7 291 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 LOC730098B7Z3J9 87 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 M0R296 226 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 FIBPO43427 364 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 TCF15Q12870 199 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 BTG3Q14201 252 aaPredicted RBP15.11■□□□□ 0.01
HDAC3-213ENST00000492506 TRIM67Q6ZTA4 783 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 CYB5R4Q7L1T6 521 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 RTN4RL1Q86UN2 441 aaPredicted RBP15.11■□□□□ 0.01
HDAC3-213ENST00000492506 LINC01599Q8WXQ3 324 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 P2RX5Q93086 422 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 SENP7Q9BQF6 1050 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 MRPL42Q9Y6G3 142 aaKnown RBP15.11■□□□□ 0.01
HDAC3-213ENST00000492506 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
HDAC3-213ENST00000492506 CSPG5O95196 566 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 ITGB1P05556 798 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 COASYQ13057 564 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 CBX2Q14781 532 aaPredicted RBP15.1■□□□□ 0.01
HDAC3-213ENST00000492506 GRM4Q14833 912 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
HDAC3-213ENST00000492506 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 FBXO47Q5MNV8 452 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 MARCH8Q5T0T0 291 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 TAF2Q6P1X5 1199 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 EFHBQ8N7U6 833 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 SMRP1Q8NCR6 262 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 SPPL3Q8TCT6 385 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 CNNM2Q9H8M5 875 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 AGO3Q9H9G7 860 aaKnown RBP15.1■□□□□ 0.01
HDAC3-213ENST00000492506 PLXNA3P51805 1871 aa15.1■□□□□ 0.01
HDAC3-213ENST00000492506 PNMA6FA0A0J9YX94 578 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 MBLAC1A4D2B0 266 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-213ENST00000492506 GLP2RO95838 553 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 NDUFV1P49821 464 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 PTPN5P54829 565 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 ZXDAP98168 799 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 TRAF1Q13077 416 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
HDAC3-213ENST00000492506 PBXIP1Q96AQ6 731 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 OSBPL3Q9H4L5 887 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
HDAC3-213ENST00000492506 OFD1O75665 1012 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 MCM4P33991 863 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 TCF7P36402 384 aaPredicted RBP15.08■□□□□ 0
HDAC3-213ENST00000492506 SP4Q02446 784 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 CCDC173Q0VFZ6 552 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 TROAPQ12815 778 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 PKN1Q16512 942 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 NAALADL2Q58DX5 795 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 TSHZ1Q6ZSZ6 1077 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 PLEKHM2Q8IWE5 1019 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 CMTR2Q8IYT2 770 aaKnown RBP15.08■□□□□ 0
HDAC3-213ENST00000492506 DNAJB3Q8WWF6 145 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 ANP32BQ92688 251 aaKnown RBP15.08■□□□□ 0
HDAC3-213ENST00000492506 IL25Q9H293 177 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 GRPEL1Q9HAV7 217 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 CDY2AQ9Y6F7 541 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 VPS13AQ96RL7 3174 aa15.08■□□□□ 0
HDAC3-213ENST00000492506 GSTTP1A0A1W2PQM5 241 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 ATP9AO75110 1047 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 PPFIA1Q13136 1202 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 GRIK4Q16099 956 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 TAF3Q5VWG9 929 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 PCNX4Q63HM2 1172 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 FBXL6Q8N531 539 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 KLHL23Q8NBE8 558 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 ZBTB10Q96DT7 871 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 PRRX2Q99811 253 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms