RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 NECAB3Q96P71 396 aaPredicted RBP16.73■□□□□ 0.27
SS18L1-205ENST00000492466 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 ANO3Q9BYT9 981 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
SS18L1-205ENST00000492466 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 VPS54Q9P1Q0 977 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 LINC01553A4QN01 128 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 PFKFB2O60825 505 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 ATP9AO75110 1047 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
SS18L1-205ENST00000492466 XBP1P17861 261 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 ZNF76P36508 570 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 HTRA4P83105 476 aaPredicted RBP16.72■□□□□ 0.27
SS18L1-205ENST00000492466 NTRK3Q16288 839 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 XRRA1Q6P2D8 792 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 ZBED2Q9BTP6 218 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 SETD4Q9NVD3 440 aa16.72■□□□□ 0.27
SS18L1-205ENST00000492466 EMSYQ7Z589 1322 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 ESYT2A0FGR8 921 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 NOP56O00567 594 aaKnown RBP16.71■□□□□ 0.27
SS18L1-205ENST00000492466 ST18O60284 1047 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 ITGB5P18084 799 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 PKN1Q16512 942 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 MCTP2Q6DN12 878 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 TEX2Q8IWB9 1127 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 IL17RAQ96F46 866 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 LMCD1Q9NZU5 365 aa16.71■□□□□ 0.27
SS18L1-205ENST00000492466 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 KCNA2P16389 499 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 SP4Q02446 784 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 RABEP1Q15276 862 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 SKIV2LQ15477 1246 aaKnown RBP16.7■□□□□ 0.26
SS18L1-205ENST00000492466 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 SP7Q8TDD2 431 aaPredicted RBP16.7■□□□□ 0.26
SS18L1-205ENST00000492466 LMBR1Q8WVP7 490 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 WASF1Q92558 559 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 GTF3C6Q969F1 213 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 CDHR1Q96JP9 859 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 TGS1Q96RS0 853 aaKnown RBP16.7■□□□□ 0.26
SS18L1-205ENST00000492466 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 COG5Q9UP83 839 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 C5orf42Q9H799 3197 aa16.7■□□□□ 0.26
SS18L1-205ENST00000492466 SIP14410 1827 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.69■□□□□ 0.26
SS18L1-205ENST00000492466 CAND2O75155 1236 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 LARGE1O95461 756 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
SS18L1-205ENST00000492466 MTMR1Q13613 665 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 ME3Q16798 604 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 AAK1Q2M2I8 961 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 FAM26DQ5JW98 314 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 SH3GLB2Q9NR46 395 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 ORC3Q9UBD5 711 aaPredicted RBP16.69■□□□□ 0.26
SS18L1-205ENST00000492466 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 INSL6Q9Y581 213 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 UBIAD1Q9Y5Z9 338 aa16.69■□□□□ 0.26
SS18L1-205ENST00000492466 GSTTP1A0A1W2PQM5 241 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 CTSHP09668 335 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 FOSBP53539 338 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 TRIM29Q14134 588 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
SS18L1-205ENST00000492466 MYOCDQ8IZQ8 938 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 RASGRP4Q8TDF6 673 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 HLA-CQ95604 372 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 TOP1MTQ969P6 601 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 GPRASP2Q96D09 838 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 C17orf80Q9BSJ5 609 aa16.68■□□□□ 0.26
SS18L1-205ENST00000492466 CHRNA1P02708 482 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 AMHP03971 560 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 GNAT1P11488 350 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 TCF7P36402 384 aaPredicted RBP16.67■□□□□ 0.26
SS18L1-205ENST00000492466 SREBF1P36956 1147 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 RPAINQ86UA6 219 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
SS18L1-205ENST00000492466 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
SS18L1-205ENST00000492466 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
SS18L1-205ENST00000492466 DTNBO60941 627 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 CLK2P49760 499 aaKnown RBP16.66■□□□□ 0.26
SS18L1-205ENST00000492466 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 IL27Q8NEV9 243 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 SEPT8Q92599 483 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
SS18L1-205ENST00000492466 JADE2Q9NQC1 790 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
SS18L1-205ENST00000492466 PCDHA4Q9UN74 947 aa16.66■□□□□ 0.26
SS18L1-205ENST00000492466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms