RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 A0A1B0GVL5 298 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 MED24O75448 989 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 LGR5O75473 907 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 PTGS1P23219 599 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 QARSP47897 775 aaKnown RBP20.88■□□□□ 0.93
MCF2L-230ENST00000491028 FAM160B1Q5W0V3 765 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 AFAP1L1Q8TED9 768 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 GOLPH3LQ9H4A5 285 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 KCNH3Q9ULD8 1083 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 TELO2Q9Y4R8 837 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 MYH9P35579 1960 aaKnown RBP20.87■□□□□ 0.93
MCF2L-230ENST00000491028 POTEFA5A3E0 1075 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 BACH1O14867 736 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 PPFIA4O75335 1185 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 SLITRK3O94933 977 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 LYPLA2O95372 231 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 MBD3O95983 291 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 SPATA31C1P0DKV0 1188 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 PSMC5P62195 406 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 CYP4A11Q02928 519 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 FAM160A1Q05DH4 1040 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 GRB10Q13322 594 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 KARSQ15046 597 aaKnown RBP20.87■□□□□ 0.93
MCF2L-230ENST00000491028 DGKDQ16760 1214 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 TMEM119Q4V9L6 283 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 CATSPER3Q86XQ3 398 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 CCDC60Q8IWA6 550 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-230ENST00000491028 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 LXNQ9BS40 222 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 AZI2Q9H6S1 392 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 ZSWIM4Q9H7M6 989 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 ZNF302Q9NR11 478 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 RGL1Q9NZL6 768 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 GABBR1Q9UBS5 961 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 HTTP42858 3142 aa20.87■□□□□ 0.93
MCF2L-230ENST00000491028 POTEB3A0JP26 581 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 ADAMTS4O75173 837 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 CST5P28325 142 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-230ENST00000491028 SYKP43405 635 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 SLC26A2P50443 739 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 NDUFA8P51970 172 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 SWSAP1Q6NVH7 229 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 POTEBQ6S5H4 581 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 C4orf19Q8IY42 314 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 BANK1Q8NDB2 785 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 PNMA5Q96PV4 448 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 PAK6Q9NQU5 681 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-230ENST00000491028 STK17AQ9UEE5 414 aa20.86■□□□□ 0.93
MCF2L-230ENST00000491028 MAFBQ9Y5Q3 323 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-230ENST00000491028 C6orf222P0C671 652 aaPredicted RBP20.85■□□□□ 0.93
MCF2L-230ENST00000491028 PLCG1P19174 1290 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 CTTNQ14247 550 aaKnown RBP20.85■□□□□ 0.93
MCF2L-230ENST00000491028 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 FSCN1Q16658 493 aaKnown RBP20.85■□□□□ 0.93
MCF2L-230ENST00000491028 RRAGBQ5VZM2 374 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 PLPPR4Q7Z2D5 763 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 TPH2Q8IWU9 490 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 FMR1NBQ8N0W7 255 aaPredicted RBP20.85■□□□□ 0.93
MCF2L-230ENST00000491028 IQUBQ8NA54 791 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 ENGASEQ8NFI3 743 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 ZNF333Q96JL9 665 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 PCYT2Q99447 389 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 SMARCAD1Q9H4L7 1026 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 DDX19AQ9NUU7 478 aaKnown RBP20.85■□□□□ 0.93
MCF2L-230ENST00000491028 USP25Q9UHP3 1055 aa20.85■□□□□ 0.93
MCF2L-230ENST00000491028 A0A087X0B3 334 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 CTAGE5O15320 804 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 POLR2DO15514 142 aaKnown RBP20.84■□□□□ 0.93
MCF2L-230ENST00000491028 ZEB2O60315 1214 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 KPNA6O60684 536 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 LGALS2P05162 132 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 CCL5P13501 91 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 LIG1P18858 919 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 STAT6P42226 847 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 STAT5BP51692 787 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
MCF2L-230ENST00000491028 ECM1Q16610 540 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 UGCGQ16739 394 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 LHX8Q68G74 356 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 PDXDC2PQ6P474 469 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 POTEGQ6S5H5 508 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 PDILTQ8N807 584 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 GLG1Q92896 1179 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 NACC1Q96RE7 527 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 ZNF215Q9UL58 517 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-230ENST00000491028 KIAA1024Q9UPX6 916 aa20.84■□□□□ 0.93
MCF2L-230ENST00000491028 PGK1P00558 417 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 MTFR1Q15390 333 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 E2F4Q16254 413 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 UTP14CQ5TAP6 766 aaKnown RBP20.83■□□□□ 0.93
MCF2L-230ENST00000491028 RNF180Q86T96 592 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 KLHDC9Q8NEP7 349 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 DHX58Q96C10 678 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 FAM167AQ96KS9 214 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 MAGEF1Q9HAY2 307 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms