RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CABYRO75952 493 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 DEXIO95424 95 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 CD4P01730 458 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 CYP2C18P33260 490 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 GGCXP38435 758 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 GNAQP50148 359 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 PSMC6P62333 389 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 SMAD3P84022 425 aaKnown RBP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 GUCY1B3Q02153 619 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 ITGA7Q13683 1181 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 PKN1Q16512 942 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 USH1GQ495M9 461 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 DUSP28Q4G0W2 176 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 FERMT3Q86UX7 667 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 FAM126BQ8IXS8 530 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 ADGRF4Q8IZF3 695 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 SLC43A3Q8NBI5 491 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 WASF1Q92558 559 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 RNPC3Q96LT9 517 aaKnown RBP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 OCSTAMPQ9BR26 566 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 LZTS2Q9BRK4 669 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 GJB4Q9NTQ9 266 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 PNMA2Q9UL42 364 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 LOC102724159A0A0B4J2E5 919 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 hCG_1642624A0A1W2PR95 340 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 DLL1O00548 723 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 CYTH3O43739 400 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 ACRP10323 421 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 CSF2RAP15509 400 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 AKAP17AQ02040 695 aaKnown RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 PWP2Q15269 919 aaKnown RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 CDC37Q16543 378 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 ASPRV1Q53RT3 343 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 KRT40Q6A162 431 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 ZNF365Q70YC5 407 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 ZBTB33Q86T24 672 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 TMEM199Q8N511 208 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 TAAR1Q96RJ0 339 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 CDX2Q99626 313 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 SPZ1Q9BXG8 430 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 TRPV6Q9H1D0 765 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 TTYH1Q9H313 450 aaPredicted RBP8.64□□□□□ -1.03
CLDN1-202ENST00000490800 TCHHQ07283 1943 aa8.64□□□□□ -1.03
CLDN1-202ENST00000490800 UMODL1Q5DID0 1318 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 MCM3APO60318 1980 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 KLRF2D3W0D1 207 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 MYL3P08590 195 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 EDNRBP24530 442 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 SMARCA1P28370 1054 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 PPIGQ13427 754 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLDN1-202ENST00000490800 QRICH1Q2TAL8 776 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 TMEM240Q5SV17 173 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 MCTP1Q6DN14 999 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 FAM173BQ6P4H8 233 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 DNERQ8NFT8 737 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 COPS5Q92905 334 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 MPHOSPH6Q99547 160 aaKnown RBP8.63□□□□□ -1.03
CLDN1-202ENST00000490800 SEZ6LQ9BYH1 1024 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 ZSCAN16Q9H4T2 348 aaPredicted RBP8.63□□□□□ -1.03
CLDN1-202ENST00000490800 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 LTBP2Q14767 1821 aa8.63□□□□□ -1.03
CLDN1-202ENST00000490800 A0A0C4DFX4 3053 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 ABCB11O95342 1321 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 GRXCR1A8MXD5 290 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 B4DLN1 442 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 KIF28PB7ZC32 967 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 PIK3CDO00329 1044 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 ZBTB24O43167 697 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 B4GALT4O60513 344 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 ARIH2O95376 493 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 TXNP10599 105 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 SCG2P13521 617 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 CPT1AP50416 773 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 MRPL12P52815 198 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 CCL23P55773 120 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 PURAQ00577 322 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 TRIM29Q14134 588 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 PFKFB3Q16875 520 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 MCF2L2Q86YR7 1114 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 OR6J1Q8NGC5 347 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 SCFD2Q8WU76 684 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 PIBF1Q8WXW3 757 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms