RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PCDHA6Q9UN73 950 aa17.87■□□□□ 0.45
COL2A1-207ENST00000490609 PCDHA8Q9Y5H6 950 aa17.87■□□□□ 0.45
COL2A1-207ENST00000490609 MYH9P35579 1960 aaKnown RBP17.87■□□□□ 0.45
COL2A1-207ENST00000490609 ZNF318Q5VUA4 2279 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 H3BQ06 376 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-207ENST00000490609 GRM6O15303 877 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 PTCRAQ6ISU1 281 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-207ENST00000490609 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 SGMS1Q86VZ5 419 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 TMTC2Q8N394 836 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 GIMAP8Q8ND71 665 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-207ENST00000490609 CLP1Q92989 425 aaKnown RBP17.86■□□□□ 0.45
COL2A1-207ENST00000490609 IL17RAQ96F46 866 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 ESYT1Q9BSJ8 1104 aa17.86■□□□□ 0.45
COL2A1-207ENST00000490609 BMPR1AP36894 532 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 GNAQP50148 359 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 DLX2Q07687 328 aaPredicted RBP17.85■□□□□ 0.45
COL2A1-207ENST00000490609 MTMR1Q13613 665 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 CTC1Q2NKJ3 1217 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 TMEM31Q5JXX7 168 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 TAF2Q6P1X5 1199 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 GJD3Q8N144 294 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 ERAP1Q9NZ08 941 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
COL2A1-207ENST00000490609 TUBE1Q9UJT0 475 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 CDY2AQ9Y6F7 541 aa17.85■□□□□ 0.45
COL2A1-207ENST00000490609 CNTNAP5Q8WYK1 1306 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 CCDC69A6NI79 296 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 ADAMTS3O15072 1205 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 ARP10275 920 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 INSRRP14616 1297 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
COL2A1-207ENST00000490609 ITGB3BPQ13352 177 aaPredicted RBP17.84■□□□□ 0.45
COL2A1-207ENST00000490609 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 TRAPPC12Q8WVT3 735 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 PABPC5Q96DU9 382 aaKnown RBP17.84■□□□□ 0.45
COL2A1-207ENST00000490609 KCNH7Q9NS40 1196 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 FAM217BQ9NTX9 383 aaPredicted RBP17.84■□□□□ 0.45
COL2A1-207ENST00000490609 BRPF3Q9ULD4 1205 aa17.84■□□□□ 0.45
COL2A1-207ENST00000490609 DGKIO75912 1065 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 DNAJB1P25685 340 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 CD52P31358 61 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 GTF2F1P35269 517 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL2A1-207ENST00000490609 HYAL1Q12794 435 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 PTPROQ16827 1216 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 FIBCD1Q8N539 461 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 CDHR1Q96JP9 859 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 MXRA8Q9BRK3 442 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 SMARCAD1Q9H4L7 1026 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.44
COL2A1-207ENST00000490609 ARIH1Q9Y4X5 557 aaPredicted RBP17.83■□□□□ 0.44
COL2A1-207ENST00000490609 TECTAO75443 2155 aa17.83■□□□□ 0.44
COL2A1-207ENST00000490609 ADGRA3Q8IWK6 1321 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 C19orf67A6NJJ6 358 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 MAFGO15525 162 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 ATG7O95352 703 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 CALM1P0DP23 149 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 CALM2P0DP24 149 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 CALM3P0DP25 149 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-207ENST00000490609 IGBP1P78318 339 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 MRPS6P82932 125 aaKnown RBP17.82■□□□□ 0.44
COL2A1-207ENST00000490609 PLCB4Q15147 1175 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 TIGD5Q53EQ6 642 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 TSHZ1Q6ZSZ6 1077 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 GLG1Q92896 1179 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 FAM122AQ96E09 287 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
COL2A1-207ENST00000490609 IGKV6D-21A0A0A0MT36 114 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 CCNE2O96020 404 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 RB1P06400 928 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 CTNNB1P35222 781 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
COL2A1-207ENST00000490609 ACTR2P61160 394 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 TMEM62Q0P6H9 643 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 ADCK5Q3MIX3 580 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 APOA5Q6Q788 366 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 HEATR3Q7Z4Q2 680 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 FAM49AQ9H0Q0 323 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-207ENST00000490609 JPH1Q9HDC5 661 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-207ENST00000490609 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 TMEM260Q9NX78 707 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 SLC9A2Q9UBY0 812 aa17.81■□□□□ 0.44
COL2A1-207ENST00000490609 USP34Q70CQ2 3546 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 NFASCO94856 1347 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 STXBP3O00186 592 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 MEIS1O00470 390 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 LINC01565O15544 149 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 ZP2Q05996 745 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 CRYGNQ8WXF5 182 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 CDHR5Q9HBB8 845 aa17.8■□□□□ 0.44
COL2A1-207ENST00000490609 AGO4Q9HCK5 861 aaKnown RBP17.8■□□□□ 0.44
COL2A1-207ENST00000490609 ALG13Q9NP73 1137 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms