RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF385CQ66K41 422 aaPredicted RBP8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 NSMFQ6X4W1 530 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 SCFD2Q8WU76 684 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 KLF16Q9BXK1 252 aaPredicted RBP8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 IFIH1Q9BYX4 1025 aaKnown RBP8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 API5Q9BZZ5 524 aaKnown RBP8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 WDFY3Q8IZQ1 3526 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 KIAA1671Q9BY89 1806 aa8.49□□□□□ -1.05
PDLIM1-203ENST00000490391 NAV2Q8IVL1 2488 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 TTC3P53804 2025 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 HAS3O00219 553 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ADAM23O75077 832 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 MBD4O95243 580 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 LMNAP02545 664 aaKnown RBP8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 GNAI2P04899 355 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 BMP3P12645 472 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 CLCN5P51795 746 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 STAT2P52630 851 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ARHGAP1Q07960 439 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 CWF19L1Q69YN2 538 aaKnown RBP8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 CCDC62Q6P9F0 684 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 UBALD2Q8IYN6 164 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 KREMEN2Q8NCW0 462 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 VN1R2Q8NFZ6 395 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 SSH3Q8TE77 659 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ATP8B4Q8TF62 1192 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 AFG1LQ8WV93 481 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 IL17RAQ96F46 866 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 SMOC2Q9H3U7 446 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ADD3Q9UEY8 706 aaKnown RBP8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 SYNPO2Q9UMS6 1093 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 PLAGL2Q9UPG8 496 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 RWDD3Q9Y3V2 267 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 LAMA5O15230 3695 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 ADGRA3Q8IWK6 1321 aa8.48□□□□□ -1.05
PDLIM1-203ENST00000490391 RSPH10B2B2RC85 870 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 F2P00734 622 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 RSPH10BP0C881 870 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 TXNP10599 105 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 NRIP1P48552 1158 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 SNAP25P60880 206 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 RBM10P98175 930 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 ANGPT1Q15389 498 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 SLFN13Q68D06 897 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 CCDC105Q8IYK2 499 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 PPP2R3CQ969Q6 453 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 CEP95Q96GE4 821 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 PLVAPQ9BX97 442 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 SEMA4AQ9H3S1 761 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 MTMR4Q9NYA4 1195 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 SORCS3Q9UPU3 1222 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 NOP58Q9Y2X3 529 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 CACNA1IQ9P0X4 2223 aa8.47□□□□□ -1.05
PDLIM1-203ENST00000490391 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 NFIBO00712 420 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 PLA2G6O60733 806 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 CHGBP05060 677 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 ITGB1P05556 798 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 USP46P62068 366 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 PDE4BQ07343 736 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 RSPO4Q2I0M5 234 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 SLC30A10Q6XR72 485 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 ZBTB33Q86T24 672 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 FAM160B2Q86V87 743 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 SERINC5Q86VE9 423 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 C7orf31Q8N865 590 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 CHURC1Q8WUH1 139 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 STAG1Q8WVM7 1258 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 SEPT8Q92599 483 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 P2RX5Q93086 422 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 GMCL1Q96IK5 515 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 S1PR5Q9H228 398 aa8.46□□□□□ -1.06
PDLIM1-203ENST00000490391 PLXNA4Q9HCM2 1894 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 KIAA1217Q5T5P2 1943 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 PI15O43692 258 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 SURF6O75683 361 aaKnown RBP8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 TTLL1O95922 423 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 ICAM1P05362 532 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 AOC1P19801 751 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 ADD2P35612 726 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 THPOP40225 353 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 KCNC3Q14003 757 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 ACAP1Q15027 740 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 KIAA0753Q2KHM9 967 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 RASGRP2Q7LDG7 609 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 RBM23Q86U06 439 aaKnown RBP8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 AMOTL1Q8IY63 956 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 KCNG4Q8TDN1 519 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms