RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 C7orf31Q8N865 590 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 ERAP1Q9NZ08 941 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 MAFBQ9Y5Q3 323 aaPredicted RBP16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 STX6O43752 255 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 HSP90AA1P07900 732 aaKnown RBP16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 RESTQ13127 1097 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 AZI2Q9H6S1 392 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 PRDM5Q9NQX1 630 aaPredicted RBP16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 NR2E3Q9Y5X4 410 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 IGSF9BQ9UPX0 1349 aa16.22■□□□□ 0.19
SRGAP3-208ENST00000490348 BACH1O14867 736 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 KIAA0355O15063 1070 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF862O60290 1169 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 PSAPP07602 524 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 CYP2C9P11712 490 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 JAK3P52333 1124 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 ADAM17P78536 824 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 ORC2Q13416 577 aaPredicted RBP16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 PKP1Q13835 747 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 PLCB4Q15147 1175 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 WNT8BQ93098 351 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF302Q9NR11 478 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 SETD4Q9NVD3 440 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 GABBR1Q9UBS5 961 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 SAMM50Q9Y512 469 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 SZT2Q5T011 3432 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 TRIP12Q14669 1992 aaPredicted RBP16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 WDR81Q562E7 1941 aa16.21■□□□□ 0.19
SRGAP3-208ENST00000490348 RBAK-RBAKDNI3L0D1 243 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 SFNP31947 248 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 TXKP42681 527 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 PTGISQ16647 500 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 MARCH8Q5T0T0 291 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 PDXDC2PQ6P474 469 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 BRAPQ7Z569 592 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 LMBR1Q8WVP7 490 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 DHX38Q92620 1227 aaKnown RBP16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 ZBTB10Q96DT7 871 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 TMEM39AQ9NV64 488 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.18
SRGAP3-208ENST00000490348 UMODL1Q5DID0 1318 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 ZBTB42B2RXF5 422 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 TLR3O15455 904 aaKnown RBP16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 TREHO43280 583 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 BAG4O95429 457 aaKnown RBP16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 OR52Z1P0C646 297 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 PTGDRQ13258 359 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 RDM1Q8NG50 284 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 WRAP73Q9P2S5 460 aaPredicted RBP16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 PCDHA12Q9UN75 941 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
SRGAP3-208ENST00000490348 C17orf102A2RUQ5 167 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 MARCH6O60337 910 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 STBD1O95210 358 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 INSRRP14616 1297 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 SLC26A2P50443 739 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 IL17AQ16552 155 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 ATP8B4Q8TF62 1192 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 FTOQ9C0B1 505 aaKnown RBP eCLIP16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
SRGAP3-208ENST00000490348 POTEB3A0JP26 581 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 POTEMA6NI47 508 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 GRIK4Q16099 956 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 TRIM71Q2Q1W2 868 aaKnown RBP16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 POTEBQ6S5H4 581 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 SERINC5Q86VE9 423 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 BANK1Q8NDB2 785 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 TRAPPC12Q8WVT3 735 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 PPP1R12CQ9BZL4 782 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 WNT8AQ9H1J5 351 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 RGL1Q9NZL6 768 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 TRPC6Q9Y210 931 aa16.18■□□□□ 0.18
SRGAP3-208ENST00000490348 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 TIMP1P01033 207 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 CYP2C18P33260 490 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 TECP42680 631 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 ATP2C1P98194 919 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 PRKCEQ02156 737 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 TRMT1LQ7Z2T5 733 aaKnown RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 ATP6V0A1Q93050 837 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 HIPK3Q9H422 1215 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 TMEM150BA6NC51 233 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 MAGEA10P43363 369 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 IGBP1P78318 339 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 BECN1Q14457 450 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms