RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 EYA4O95677 639 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 POLR2MP0CAP2 368 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 MGAT3Q09327 533 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 IMMTQ16891 758 aaKnown RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
USP39-216ENST00000490193 EP400NLQ6ZTU2 488 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 LMBR1Q8WVP7 490 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 EDAQ92838 391 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 P2RX5Q93086 422 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 OSBPL3Q9H4L5 887 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 RIOX1Q9H6W3 641 aa9.49□□□□□ -0.89
USP39-216ENST00000490193 DGKIO75912 1065 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 CHRNA1P02708 482 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 ADAM15Q13444 863 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 CAMK1Q14012 370 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 PKN1Q16512 942 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 CRIPAKQ8N1N5 446 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 RILPL2Q969X0 211 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 PRRX2Q99811 253 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 SENP7Q9BQF6 1050 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 MUTYHQ9UIF7 546 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 CD207Q9UJ71 328 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 PLXNA4Q9HCM2 1894 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
USP39-216ENST00000490193 PNMA6FA0A0J9YX94 578 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 MBLAC1A4D2B0 266 aaPredicted RBP9.47□□□□□ -0.89
USP39-216ENST00000490193 STXBP3O00186 592 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 HIP1O00291 1037 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 ENPP3O14638 875 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 CYTH3O43739 400 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 GHRP10912 638 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 ARHGAP4P98171 946 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 LPIN1Q14693 890 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
USP39-216ENST00000490193 GRM4Q14833 912 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 FBXO47Q5MNV8 452 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 XRRA1Q6P2D8 792 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 CWC27Q6UX04 472 aaKnown RBP9.47□□□□□ -0.89
USP39-216ENST00000490193 FCHSD1Q86WN1 690 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 HOMER1Q86YM7 354 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 ZFP91Q96JP5 570 aaPredicted RBP9.47□□□□□ -0.89
USP39-216ENST00000490193 PIGSQ96S52 555 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 PLA2G2EQ9NZK7 142 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 PLAGL2Q9UPG8 496 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
USP39-216ENST00000490193 CFAP54Q96N23 3096 aa9.46□□□□□ -0.89
USP39-216ENST00000490193 LOC730098B7Z3J9 87 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
USP39-216ENST00000490193 LINC01565O15544 149 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 RPLP2P05387 115 aaKnown RBP9.46□□□□□ -0.9
USP39-216ENST00000490193 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.9
USP39-216ENST00000490193 PTPN5P54829 565 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 COASYQ13057 564 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 BTG3Q14201 252 aaPredicted RBP9.46□□□□□ -0.9
USP39-216ENST00000490193 CLUL1Q15846 466 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 PCNX4Q63HM2 1172 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 RUFY4Q6ZNE9 571 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 CYB5R4Q7L1T6 521 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 RSPH3Q86UC2 560 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 PLEKHM2Q8IWE5 1019 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 SMC5Q8IY18 1101 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 CMTR2Q8IYT2 770 aaKnown RBP9.46□□□□□ -0.9
USP39-216ENST00000490193 EFHBQ8N7U6 833 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 GIMAP8Q8ND71 665 aaPredicted RBP9.46□□□□□ -0.9
USP39-216ENST00000490193 LINC01599Q8WXQ3 324 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 PPP2R3CQ969Q6 453 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 LNPKQ9C0E8 428 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 DIAPH3Q9NSV4 1193 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 CLEC1BQ9P126 229 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
USP39-216ENST00000490193 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
USP39-216ENST00000490193 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 M0R296 226 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 PIK3CDO00329 1044 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 ITGB1P05556 798 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 DNAJB1P25685 340 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 NDUFV1P49821 464 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 RRP1P56182 461 aaKnown RBP9.45□□□□□ -0.9
USP39-216ENST00000490193 TROAPQ12815 778 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 PPFIA1Q13136 1202 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 MARCH8Q5T0T0 291 aa9.45□□□□□ -0.9
USP39-216ENST00000490193 UTP14CQ5TAP6 766 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms